CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER90205
EER93354
EER95686
EES04582

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G50960.1	EER90205	AT5G44340.1	18390592
AT3G50960.1	EER93354	AT5G44340.1	18390592
AT3G50960.1	EES04582	AT5G44340.1	18390592
AT3G50960.1	EER95686	AT5G62690.1	18390592
AT3G50960.1	EER95686	AT5G62700.1	18390592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048892_P001	Maize	extracellular	96.07	96.07
Zm00001d007600_P001	Maize	cytosol	96.07	96.07
Os05t0255600-01	Rice	cytosol	92.14	91.74
Os11t0604700-00	Rice	cytosol	91.27	90.87
HORVU7Hr1G029120.1	Barley	golgi	42.79	87.5
TraesCS7B01G044100.1	Wheat	cytosol	86.03	85.65
Zm00001d030574_P001	Maize	cytosol, extracellular, plastid	41.48	84.07
Solyc02g062540.2.1	Tomato	cytosol	78.17	78.51
PGSC0003DMT400040052	Potato	cytosol	77.29	77.63
GSMUA_Achr2P14840_001	Banana	cytosol	69.87	76.56
Bra036844.1-P	Field mustard	cytosol	76.42	76.09
CDY26529	Canola	cytosol	75.98	75.65
CDX73765	Canola	cytosol	75.55	75.22
CDX77968	Canola	cytosol	75.55	75.22
KRH69862	Soybean	cytosol	75.55	74.89
AT5G66410.1	Thale cress	cytosol	75.11	74.78
KRH17436	Soybean	cytosol, extracellular	75.11	74.46
AT3G50960.1	Thale cress	cytosol	74.67	74.35
VIT_04s0023g02390.t01	Wine grape	cytosol	74.67	74.35
CDY57635	Canola	cytosol	74.24	73.91
Bra038875.1-P	Field mustard	nucleus	70.31	72.52
VIT_14s0036g00970.t01	Wine grape	plasma membrane	74.67	70.08
Zm00001d033260_P001	Maize	plastid	43.67	64.94
Zm00001d025839_P001	Maize	cytosol	45.41	61.9
Zm00001d007720_P003	Maize	endoplasmic reticulum, extracellular, plastid	34.06	56.12
Zm00001d009423_P001	Maize	endoplasmic reticulum, extracellular, plastid	34.06	56.12
EES14790	Sorghum	cytosol	32.31	35.07

Protein Annotations

EnsemblPlants:EES08806	EnsemblPlantsGene:SORBI_3005G180800	Gene3D:3.40.30.10	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150
GO:GO:0009987	GO:GO:0019725	GO:GO:0045454	InterPro:IPR013766	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain
PANTHER:PTHR21148	PANTHER:PTHR21148:SF40	PFAM:PF00085	ProteinID:EES08806	ProteinID:EES08806.2	SEG:seg
SUPFAM:SSF52833	UniParc:UPI000220718A	UniProt:C5Y5X8	MapMan:20.1.2.3	:	:

Description

hypothetical protein

Coordinates

chr5:+:66366701..66369587

Molecular Weight (calculated)

25729.5 Da

IEP (calculated)

5.133

GRAVY (calculated)

-0.574

Length

229 amino acids

Sequence
(BLAST)

001: MDPDAVKSTL SNLAFGNVIA AAARDLQKEM VAKDKAQAAP ASHDEVDLDE LLDDPELEKL HAERIAALKK EAEKREVLKR QGHGEYREIT EGDFLGEVTG
101: SEKVICHFYH REFYRCKIMD KHLKALAPIY VGTKFVKLDA ENAPFFVSKL AIKTLPCVIL FKKGIAVDRL VGFQDLGSKD DFSTRALENI LKMKGIIDEK
201: KKDDDDDDEE SESKNRRVRS STAQDSDSD

Best Arabidopsis Sequence Match ( AT5G66410.1 )
(BLAST)

001: MDPDTVKSTL SNLAFGNVLA AAARDYKKEV LANEKAQGSR PVNEEVDLDE LMDDPELEKL HADRIAALRR EVEKREAFKR QGHGEYREVS EGDFLGEVTR
101: SEKVICHFYH KEFYRCKIMD KHLKTLAPRH VDTKFIKMDA ENAPFFVTKL AIKTLPCVIL FSKGIAMDRL VGFQDLGAKD DFSTTKLENL LVKKGMLSEK
201: RKEEDEEDYE YQESIRRSVR SSANVDSDSD

Arabidopsis Description

PLP3BPLP3b [Source:UniProtKB/TrEMBL;Acc:A0A178URB4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.