Factsheet for Zm00001d033260_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d008216_P002
Zm00001d013139_P001
Zm00001d015348_P002
Zm00001d034022_P001
Zm00001d036626_P001
Zm00001d040509_P001
Zm00001d046996_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G50960.1	Zm00001d013139_P001	AT5G44340.1	18390592
AT3G50960.1	Zm00001d015348_P002	AT5G44340.1	18390592
AT3G50960.1	Zm00001d034022_P001	AT5G44340.1	18390592
AT3G50960.1	Zm00001d036626_P001	AT5G44340.1	18390592
AT3G50960.1	Zm00001d046996_P001	AT5G44340.1	18390592
AT3G50960.1	Zm00001d008216_P002	AT5G62690.1	18390592
AT3G50960.1	Zm00001d040509_P001	AT5G62690.1	18390592
AT3G50960.1	Zm00001d008216_P002	AT5G62700.1	18390592
AT3G50960.1	Zm00001d040509_P001	AT5G62700.1	18390592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d030574_P001	Maize	cytosol, extracellular, plastid	64.94	88.5
HORVU7Hr1G029120.1	Barley	golgi	56.49	77.68
Zm00001d025839_P001	Maize	cytosol	70.13	64.29
Zm00001d007720_P003	Maize	endoplasmic reticulum, extracellular, plastid	46.1	51.08
Zm00001d009423_P001	Maize	endoplasmic reticulum, extracellular, plastid	46.1	51.08
Zm00001d048892_P001	Maize	extracellular	68.18	45.85
EES08806	Sorghum	cytosol	64.94	43.67
Zm00001d007600_P001	Maize	cytosol	64.94	43.67
Os11t0604700-00	Rice	cytosol	59.74	40.0
Os05t0255600-01	Rice	cytosol	58.44	39.13
TraesCS7B01G044100.1	Wheat	cytosol	57.79	38.7
VIT_04s0023g02390.t01	Wine grape	cytosol	50.0	33.48
Bra038875.1-P	Field mustard	nucleus	48.05	33.33
CDX77968	Canola	cytosol	49.35	33.04
Bra036844.1-P	Field mustard	cytosol	49.35	33.04
Solyc02g062540.2.1	Tomato	cytosol	48.7	32.89
CDY26529	Canola	cytosol	48.7	32.61
CDX73765	Canola	cytosol	48.7	32.61
KRH69862	Soybean	cytosol	48.7	32.47
PGSC0003DMT400040052	Potato	cytosol	48.05	32.46
AT5G66410.1	Thale cress	cytosol	48.05	32.17
CDY57635	Canola	cytosol	48.05	32.17
AT3G50960.1	Thale cress	cytosol	48.05	32.17
KRH17436	Soybean	cytosol, extracellular	48.05	32.03
VIT_14s0036g00970.t01	Wine grape	plasma membrane	48.7	30.74
GSMUA_Achr2P14840_001	Banana	cytosol	38.31	28.23
Zm00001d050225_P001	Maize	cytosol	27.27	19.81

Protein Annotations

EnsemblPlants:Zm00001d033260_P001	EnsemblPlants:Zm00001d033260_T001	EnsemblPlantsGene:Zm00001d033260	Gene3D:3.40.30.10	InterPro:Thioredoxin-like_sf	ncoils:Coil
PANTHER:PTHR21148	PANTHER:PTHR21148:SF40	ProteinID:ONM07080.1	SEG:seg	SUPFAM:SSF52833	UniParc:UPI000843ACFC
UniProt:A0A1D6KX95	MapMan:35.1	:	:	:	:

Description

Thioredoxin domain-containing protein PLP3B

Coordinates

chr1:+:256385038..256387598

Molecular Weight (calculated)

17512.1 Da

IEP (calculated)

4.664

GRAVY (calculated)

-0.240

Length

154 amino acids

Sequence
(BLAST)

001: MELYPIVVPY CQSSINSLTF SLKEFDLSVP LDTDEITRIM DKNLKTLALV YVGIKFVKLD VELQNAPFFV AKLAIKALPC VILFKKGIDV DRLVGFQDLR
101: SKEDFPTRAL EHILILKTKG IIDEKKKDDD DDDEESEAKN RRVRSSTAQD SDSD

Best Arabidopsis Sequence Match ( AT5G66410.1 )
(BLAST)

001: MDPDTVKSTL SNLAFGNVLA AAARDYKKEV LANEKAQGSR PVNEEVDLDE LMDDPELEKL HADRIAALRR EVEKREAFKR QGHGEYREVS EGDFLGEVTR
101: SEKVICHFYH KEFYRCKIMD KHLKTLAPRH VDTKFIKMDA ENAPFFVTKL AIKTLPCVIL FSKGIAMDRL VGFQDLGAKD DFSTTKLENL LVKKGMLSEK
201: RKEEDEEDYE YQESIRRSVR SSANVDSDSD

Arabidopsis Description

PLP3BPLP3b [Source:UniProtKB/TrEMBL;Acc:A0A178URB4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.