Factsheet for TraesCS7B01G044100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4B01G366500.1
TraesCS5A01G416400.1
TraesCS5A01G534300.1
TraesCS5B01G418700.1
TraesCS5D01G424100.1
TraesCS6B01G169300.1
TraesCS6D01G130500.2
TraesCS7A01G466600.1
TraesCS7D01G454200.1
TraesCSU01G137900.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G50960.1	TraesCS5A01G416400.1	AT5G44340.1	18390592
AT3G50960.1	TraesCS5B01G418700.1	AT5G44340.1	18390592
AT3G50960.1	TraesCS5D01G424100.1	AT5G44340.1	18390592
AT3G50960.1	TraesCS6B01G169300.1	AT5G44340.1	18390592
AT3G50960.1	TraesCS6D01G130500.2	AT5G44340.1	18390592
AT3G50960.1	TraesCS7A01G466600.1	AT5G44340.1	18390592
AT3G50960.1	TraesCS7D01G454200.1	AT5G44340.1	18390592
AT3G50960.1	TraesCS4B01G366500.1	AT5G62690.1	18390592
AT3G50960.1	TraesCS5A01G534300.1	AT5G62690.1	18390592
AT3G50960.1	TraesCSU01G137900.1	AT5G62690.1	18390592
AT3G50960.1	TraesCS4B01G366500.1	AT5G62700.1	18390592
AT3G50960.1	TraesCS5A01G534300.1	AT5G62700.1	18390592
AT3G50960.1	TraesCSU01G137900.1	AT5G62700.1	18390592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G029120.1	Barley	golgi	47.83	98.21
Os11t0604700-00	Rice	cytosol	86.52	86.52
Os05t0255600-01	Rice	cytosol	86.09	86.09
EES08806	Sorghum	cytosol	85.65	86.03
Zm00001d048892_P001	Maize	extracellular	85.22	85.59
Zm00001d007600_P001	Maize	cytosol	84.35	84.72
GSMUA_Achr2P14840_001	Banana	cytosol	68.7	75.6
Zm00001d030574_P001	Maize	cytosol, extracellular, plastid	36.96	75.22
CDY26529	Canola	cytosol	74.78	74.78
Bra036844.1-P	Field mustard	cytosol	74.78	74.78
AT5G66410.1	Thale cress	cytosol	74.78	74.78
CDX77968	Canola	cytosol	74.35	74.35
CDX73765	Canola	cytosol	73.91	73.91
CDY57635	Canola	cytosol	73.04	73.04
Solyc02g062540.2.1	Tomato	cytosol	71.74	72.37
KRH69862	Soybean	cytosol	72.61	72.29
AT3G50960.1	Thale cress	cytosol	72.17	72.17
Bra038875.1-P	Field mustard	nucleus	69.13	71.62
PGSC0003DMT400040052	Potato	cytosol	70.87	71.49
KRH17436	Soybean	cytosol, extracellular	71.74	71.43
VIT_04s0023g02390.t01	Wine grape	cytosol	70.87	70.87
VIT_14s0036g00970.t01	Wine grape	plasma membrane	70.87	66.8
Zm00001d033260_P001	Maize	plastid	38.7	57.79
Zm00001d025839_P001	Maize	cytosol	41.3	56.55
Zm00001d007720_P003	Maize	endoplasmic reticulum, extracellular, plastid	31.74	52.52
Zm00001d009423_P001	Maize	endoplasmic reticulum, extracellular, plastid	31.74	52.52
TraesCS3B01G432200.1	Wheat	cytosol	30.43	33.33

Protein Annotations

EnsemblPlants:TraesCS7B01G044100.1	EnsemblPlantsGene:TraesCS7B01G044100	Gene3D:3.40.30.10	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725
GO:GO:0045454	InterPro:IPR013766	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	PANTHER:PTHR21148	PANTHER:PTHR21148:SF40
PFAM:PF00085	SEG:seg	SUPFAM:SSF52833	TIGR:cd02989	MapMan:20.1.2.3	:

Description

No Description!

Coordinates

chr7B:+:43876824..43878698

Molecular Weight (calculated)

26101.1 Da

IEP (calculated)

5.496

GRAVY (calculated)

-0.600

Length

230 amino acids

Sequence
(BLAST)

001: MDPDEVKSKL QGLAFGNVLA AAARDYKKEV IAKEKAQAAP AIHDEVDLDE LLDDPELEKL HAERLAALKR EVEKREVLKR QGHGEYREIT EGDFLGEVTR
101: GDKVICHFYH REFYRCKIMD KHLKALAPVY LGTKFVKLDA ENAPFFVAKL AIKTLPCVIL FKKGIAVDRL VGFDDLGSKD DFSTRALENV LKRKGIIEEK
201: KKDDDEEDDE TDMSKDRRVR SSTAYGSDSD

Best Arabidopsis Sequence Match ( AT5G66410.1 )
(BLAST)

001: MDPDTVKSTL SNLAFGNVLA AAARDYKKEV LANEKAQGSR PVNEEVDLDE LMDDPELEKL HADRIAALRR EVEKREAFKR QGHGEYREVS EGDFLGEVTR
101: SEKVICHFYH KEFYRCKIMD KHLKTLAPRH VDTKFIKMDA ENAPFFVTKL AIKTLPCVIL FSKGIAMDRL VGFQDLGAKD DFSTTKLENL LVKKGMLSEK
201: RKEEDEEDYE YQESIRRSVR SSANVDSDSD

Arabidopsis Description

PLP3BPLP3b [Source:UniProtKB/TrEMBL;Acc:A0A178URB4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.