Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d030574_P001 | Maize | cytosol, extracellular, plastid | 61.31 | 91.15 |
| HORVU7Hr1G029120.1 | Barley | golgi | 54.17 | 81.25 |
| Zm00001d033260_P001 | Maize | plastid | 64.29 | 70.13 |
| Zm00001d007720_P003 | Maize | endoplasmic reticulum, extracellular, plastid | 47.62 | 57.55 |
| Zm00001d009423_P001 | Maize | endoplasmic reticulum, extracellular, plastid | 47.62 | 57.55 |
| Zm00001d048892_P001 | Maize | extracellular | 64.29 | 47.16 |
| EES08806 | Sorghum | cytosol | 61.9 | 45.41 |
| Zm00001d007600_P001 | Maize | cytosol | 61.9 | 45.41 |
| Os11t0604700-00 | Rice | cytosol | 56.55 | 41.3 |
| TraesCS7B01G044100.1 | Wheat | cytosol | 56.55 | 41.3 |
| Os05t0255600-01 | Rice | cytosol | 55.36 | 40.43 |
| Bra038875.1-P | Field mustard | nucleus | 48.81 | 36.94 |
| CDX77968 | Canola | cytosol | 49.4 | 36.09 |
| Bra036844.1-P | Field mustard | cytosol | 49.4 | 36.09 |
| CDY26529 | Canola | cytosol | 48.81 | 35.65 |
| CDY57635 | Canola | cytosol | 48.81 | 35.65 |
| CDX73765 | Canola | cytosol | 48.81 | 35.65 |
| PGSC0003DMT400040052 | Potato | cytosol | 48.21 | 35.53 |
| Solyc02g062540.2.1 | Tomato | cytosol | 48.21 | 35.53 |
| KRH69862 | Soybean | cytosol | 48.81 | 35.5 |
| AT5G66410.1 | Thale cress | cytosol | 48.21 | 35.22 |
| KRH17436 | Soybean | cytosol, extracellular | 48.21 | 35.06 |
| VIT_04s0023g02390.t01 | Wine grape | cytosol | 47.62 | 34.78 |
| AT3G50960.1 | Thale cress | cytosol | 47.62 | 34.78 |
| VIT_14s0036g00970.t01 | Wine grape | plasma membrane | 47.02 | 32.38 |
| GSMUA_Achr2P14840_001 | Banana | cytosol | 38.1 | 30.62 |
| Zm00001d050225_P001 | Maize | cytosol | 30.95 | 24.53 |
Protein Annotations
| EnsemblPlants:Zm00001d025839_P001 | EnsemblPlants:Zm00001d025839_T001 | EnsemblPlantsGene:Zm00001d025839 | EntrezGene:103642830 | Gene3D:3.40.30.10 | InterPro:Thioredoxin-like_sf |
| PANTHER:PTHR21148 | PANTHER:PTHR21148:SF40 | ProteinID:AQK44829.1 | SEG:seg | SUPFAM:SSF52833 | UniParc:UPI0004DEB698 |
| UniProt:A0A1D6JAA6 | MapMan:35.1 | : | : | : | : |
Description
Thioredoxin domain-containing protein PLP3B
Coordinates
chr10:+:131429029..131432842
Molecular Weight (calculated)
18881.5 Da
IEP (calculated)
5.636
GRAVY (calculated)
-0.373
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQEHLHLTM VHSLYSSLSP LDSTNRCSCL QLNWQTEGGA GGAKFSQFGA DLSTIMDKHL KTLAPVYVGT KFVKLDAEYA PFFVAKLAIK TLPCVILFKK
101: DIVVDRLVGF QDLRSKDDFL TRALEHILIL KTKGIIDEKK KDDDDDDEES EAKNRRVRSS TAQDSDSD
101: DIVVDRLVGF QDLRSKDDFL TRALEHILIL KTKGIIDEKK KDDDDDDEES EAKNRRVRSS TAQDSDSD
001: MDPDTVKSTL SNLAFGNVLA AAARDYKKEV LANEKAQGSR PVNEEVDLDE LMDDPELEKL HADRIAALRR EVEKREAFKR QGHGEYREVS EGDFLGEVTR
101: SEKVICHFYH KEFYRCKIMD KHLKTLAPRH VDTKFIKMDA ENAPFFVTKL AIKTLPCVIL FSKGIAMDRL VGFQDLGAKD DFSTTKLENL LVKKGMLSEK
201: RKEEDEEDYE YQESIRRSVR SSANVDSDSD
101: SEKVICHFYH KEFYRCKIMD KHLKTLAPRH VDTKFIKMDA ENAPFFVTKL AIKTLPCVIL FSKGIAMDRL VGFQDLGAKD DFSTTKLENL LVKKGMLSEK
201: RKEEDEEDYE YQESIRRSVR SSANVDSDSD
Arabidopsis Description
PLP3BPLP3b [Source:UniProtKB/TrEMBL;Acc:A0A178URB4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.