Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06672 | Canola | nucleus | 97.54 | 98.02 |
| AT1G07050.2 | Thale cress | nucleus | 70.94 | 72.73 |
| VIT_06s0004g07210.t01 | Wine grape | nucleus | 33.5 | 67.33 |
| KRH17099 | Soybean | nucleus | 47.29 | 43.64 |
| KRH72745 | Soybean | nucleus | 43.35 | 38.26 |
| Bra023461.1-P | Field mustard | cytosol | 24.63 | 32.68 |
| Bra032273.1-P | Field mustard | nucleus | 30.54 | 19.75 |
| Bra006252.1-P | Field mustard | nucleus | 28.57 | 19.27 |
| Bra012475.1-P | Field mustard | nucleus | 28.08 | 13.97 |
| Bra020461.1-P | Field mustard | nucleus | 27.09 | 13.96 |
| Bra019134.1-P | Field mustard | plastid | 26.11 | 13.84 |
| Bra033925.1-P | Field mustard | nucleus | 26.6 | 13.47 |
| Bra002752.1-P | Field mustard | nucleus, plastid | 25.62 | 13.23 |
| Bra024750.1-P | Field mustard | nucleus | 26.6 | 13.04 |
| Bra013939.1-P | Field mustard | plastid | 24.14 | 12.83 |
| Bra004035.1-P | Field mustard | nucleus | 25.62 | 10.97 |
| Bra008763.1-P | Field mustard | nucleus, plastid | 28.57 | 10.84 |
| Bra010994.1-P | Field mustard | nucleus | 18.72 | 9.34 |
| Bra023462.1-P | Field mustard | nucleus | 3.45 | 4.4 |
Protein Annotations
| EnsemblPlants:Bra015548.1 | EnsemblPlants:Bra015548.1-P | EnsemblPlantsGene:Bra015548 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:CCT_domain | InterPro:IPR010402 |
| PANTHER:PTHR31874 | PANTHER:PTHR31874:SF18 | PFAM:PF06203 | PFscan:PS51017 | SEG:seg | UniParc:UPI0002544D9C |
| UniProt:M4DGC5 | MapMan:15.5.1.2 | : | : | : | : |
Description
AT1G07050 (E=4e-074) | CONSTANS-like protein-related
Coordinates
chrA10:+:1127207..1128077
Molecular Weight (calculated)
24337.9 Da
IEP (calculated)
4.818
GRAVY (calculated)
-1.207
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTQRLPKKE EQEEEVADHQ PFSIFESINA FSQDQHYHSV DGFDRIFDMN IDSLSCSHEL NWDFWKEEDD EEDVKEEEKS LSTDHEGSSS GFWDNTSTDY
101: EEYRELGLKL NLNHQEVIDA WSDRRQQPLW TDTSMLMAPA SALYRGEVPV MDEERNTRRE ASVLRYKEKR QSRLFSKKIR YQVRKLNADK RPRFKGRFVR
201: RET
101: EEYRELGLKL NLNHQEVIDA WSDRRQQPLW TDTSMLMAPA SALYRGEVPV MDEERNTRRE ASVLRYKEKR QSRLFSKKIR YQVRKLNADK RPRFKGRFVR
201: RET
001: MDTQRLPKKE EEEEEDHLLS STFESINGHS RDQHNHSIDD FESIFDITID NLSCSNELTW DFWEEDEDED VGEEEKRSST DQEGSSFGFW ENKPTDYEDK
101: DLGLKLNLNH QEVIDAWSDH QKPLWTDTST LDNSVYRGEV PVIEEKRNMR REASVLRYKE KRQSRLFSKK IRYQVRKLNA DKRPRFKGRF VKRET
101: DLGLKLNLNH QEVIDAWSDH QKPLWTDTST LDNSVYRGEV PVIEEKRNMR REASVLRYKE KRQSRLFSKK IRYQVRKLNA DKRPRFKGRF VKRET
Arabidopsis Description
CCT motif family protein [Source:TAIR;Acc:AT1G07050]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.