Factsheet for Bra008763.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, plastid

Predictor Summary:

plastid 6
golgi 1
nucleus 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69586	Canola	nucleus, plastid	60.37	97.88
CDY09849	Canola	nucleus	57.2	92.45
Bra023461.1-P	Field mustard	cytosol	24.67	86.27
Bra006252.1-P	Field mustard	nucleus	42.43	75.42
Bra023462.1-P	Field mustard	nucleus	20.75	69.81
VIT_14s0219g00220.t01	Wine grape	nucleus, plastid	23.93	41.29
GSMUA_Achr11P...	Banana	nucleus	14.58	41.27
HORVU2Hr1G056960.1	Barley	peroxisome	7.29	37.14
KRH07084	Soybean	plastid	22.06	33.33
GSMUA_Achr10P...	Banana	nucleus	17.57	32.64
KRG94369	Soybean	plastid	21.5	32.49
Solyc02g093590.2.1	Tomato	nucleus	18.88	31.56
PGSC0003DMT400032849	Potato	nucleus	18.88	31.27
Bra015548.1-P	Field mustard	nucleus	10.84	28.57
KXG24303	Sorghum	mitochondrion, nucleus	15.14	27.46
Zm00001d049651_P001	Maize	mitochondrion, nucleus, peroxisome, plastid	13.83	27.31
TraesCS7D01G311500.1	Wheat	nucleus	14.39	26.55
Zm00001d035134_P001	Maize	plastid	13.08	26.22
TraesCS7B01G215100.1	Wheat	nucleus	14.21	25.76
TraesCS7A01G314300.1	Wheat	nucleus	14.21	25.5
Os08t0119700-00	Rice	plastid	15.51	23.45
HORVU7Hr1G074960.1	Barley	nucleus	7.85	18.58
Bra032273.1-P	Field mustard	nucleus	10.84	18.47
Bra020461.1-P	Field mustard	nucleus	12.34	16.75
Bra013939.1-P	Field mustard	plastid	11.78	16.49
Bra033925.1-P	Field mustard	nucleus	12.15	16.21
Bra019134.1-P	Field mustard	plastid	11.59	16.19
Bra012475.1-P	Field mustard	nucleus	12.34	16.18
Bra002752.1-P	Field mustard	nucleus, plastid	11.78	16.03
Bra024750.1-P	Field mustard	nucleus	12.15	15.7
HORVU7Hr1G074920.1	Barley	extracellular, mitochondrion	8.6	15.44
Bra004035.1-P	Field mustard	nucleus	11.96	13.5
Bra010994.1-P	Field mustard	nucleus	9.16	12.04

Protein Annotations

Gene3D:2.60.40.420	MapMan:35.1	EnsemblPlantsGene:Bra008763	EnsemblPlants:Bra008763.1	EnsemblPlants:Bra008763.1-P	InterPro:CCT_domain
InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0022900	InterPro:IPR003245	InterPro:IPR008972	InterPro:IPR010402
UniProt:M4CX16	PFAM:PD003122	PFAM:PF02298	PFAM:PF06203	PFscan:PS51017	PFscan:PS51485
PANTHER:PTHR31874	PANTHER:PTHR31874:SF18	InterPro:Phytocyanin_dom	SUPFAM:SSF49503	UniParc:UPI000254536F	SEG:seg

Description

AT5G14370 (E=3e-100) | LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CIL (TAIR:AT4G25990.1); Has 1815 Blast hits to 1506 proteins in 139 species: Archae - 0; Bacteria - 8; Metazoa - 291; Fungi - 53; Plants - 1145; Viruses - 0; Other Eukaryotes - 318 (source: NCBI BLink).

Coordinates

chrA10:+:13747298..13752870

Molecular Weight (calculated)

60153.3 Da

IEP (calculated)

10.223

GRAVY (calculated)

-0.788

Length

535 amino acids

Sequence
(BLAST)

001: MCSLTSPAGE VNQSKRRSKR IKKRKQMEST SMDKSPSNLE TSRRQIRRKT KRPKFLSLKL ELGTSHEIEE SRGTTKSKKK KKKKQKQSKT KGVDTTAFKE
101: KKRAETVGGE KEEEHYDNVA AYLFSSATDS SMSSIQDLLP SSAVHVDCGG GRNLPPYDRQ EHGGSSSSSL LKTAMRKGAS KEEETTEERW VSYSEVVEEV
201: MSRSGTPRCC GGDGKDGRRS LALKLDYEQI MEAWSDKGTL YVDGEPPQTV PDLHGSADVF NGGGDSGSLW TVPEMETTER LWRGHREASL LRYKEKRQNR
301: LFSKRIRYEV RKLNAEKRPR VKSNDRVTNT RFTLVQVFTA RLVVHIPNAM HPVKTAYMSR PDSTTTGKGV PNVRNVGETT IAATPKHAMA EQTSGEVGAS
401: PVFLVSSNEY KLHWVIPPAN VSTSLNDWAS SQRFQVGDTI RFKYKKDSVM QVTKEGYMQC NSSYPRFYSN TGKTRFMFDH SVPYYFKSGT SGYCEKGQKM
501: IVEVMTQDRT TTSVAPTPAI AVWLCFFSFT LSLVA

Best Arabidopsis Sequence Match ( AT5G14370.1 )
(BLAST)

001: MCSNKASPVV GEEKQSTRSS KRIKKRKNRE ATTTMEDKSS SNLDASRKIR TKTKKPKFLS LKLELNTSHE INENPRSKKS KKKNNNKKQS KKKEPDTTPF
101: KEKKRAETTT TLGGGEKEEE QYDTVAAYLF NSATDSTISS IHDLLPSSAA TDVDCGGERN NLSPYDRQDH GSSSSSLLRT AMRKGASEEE ETTEERWVSY
201: SEVVEEVMSR SGTPRCCGGG DGNDGRPSLA LKLDYEQIME AWSDKGTLYV DGEPPQTVPD LHASADGFND GGEAGNLWAV PEMETTERLW RGHREASLLR
301: YKEKRQNRLF SKRIRYQVRK LNAEKRPRVK GRFVKREDS

Arabidopsis Description

CCT motif family protein [Source:UniProtKB/TrEMBL;Acc:Q949T9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.