Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 1
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG94369 | Soybean | plastid | 83.62 | 83.62 |
| CDX70561 | Canola | nucleus | 22.03 | 51.66 |
| Bra023461.1-P | Field mustard | cytosol | 22.32 | 51.63 |
| VIT_14s0219g00220.t01 | Wine grape | nucleus, plastid | 42.09 | 48.06 |
| GSMUA_Achr11P... | Banana | nucleus | 20.9 | 39.15 |
| Solyc02g093590.2.1 | Tomato | nucleus | 34.18 | 37.81 |
| CDX85600 | Canola | nucleus | 33.9 | 37.74 |
| CDX69586 | Canola | nucleus, plastid | 34.46 | 36.97 |
| AT5G14370.1 | Thale cress | nucleus | 35.03 | 36.58 |
| CDY09849 | Canola | nucleus | 34.18 | 36.56 |
| CDX91067 | Canola | nucleus | 33.33 | 36.53 |
| PGSC0003DMT400032849 | Potato | nucleus | 32.77 | 35.91 |
| HORVU2Hr1G056960.1 | Barley | peroxisome | 10.45 | 35.24 |
| Bra006252.1-P | Field mustard | nucleus | 29.66 | 34.88 |
| CDX78575 | Canola | nucleus | 29.66 | 34.88 |
| GSMUA_Achr10P... | Banana | nucleus | 28.25 | 34.72 |
| KRH17099 | Soybean | nucleus | 18.93 | 30.45 |
| KRH72745 | Soybean | nucleus | 18.36 | 28.26 |
| TraesCS7D01G311500.1 | Wheat | nucleus | 22.88 | 27.93 |
| KXG24303 | Sorghum | mitochondrion, nucleus | 23.16 | 27.8 |
| TraesCS7A01G314300.1 | Wheat | nucleus | 22.88 | 27.18 |
| TraesCS7B01G215100.1 | Wheat | nucleus | 22.6 | 27.12 |
| Zm00001d049651_P001 | Maize | mitochondrion, nucleus, peroxisome, plastid | 20.62 | 26.94 |
| Zm00001d035134_P001 | Maize | plastid | 18.93 | 25.09 |
| Os08t0119700-00 | Rice | plastid | 24.29 | 24.29 |
| Bra008763.1-P | Field mustard | nucleus, plastid | 33.33 | 22.06 |
| Bra023462.1-P | Field mustard | nucleus | 9.6 | 21.38 |
| HORVU7Hr1G074960.1 | Barley | nucleus | 12.43 | 19.47 |
| KRH60334 | Soybean | nucleus | 19.77 | 19.18 |
| KRH41630 | Soybean | nucleus | 19.49 | 18.6 |
| HORVU7Hr1G074920.1 | Barley | extracellular, mitochondrion | 15.25 | 18.12 |
| KRG90815 | Soybean | nucleus | 21.19 | 17.94 |
| KRH35955 | Soybean | nucleus | 20.9 | 17.66 |
| KRH48479 | Soybean | nucleus | 21.19 | 17.56 |
| KRH02778 | Soybean | nucleus, plastid | 19.49 | 17.34 |
| KRH19100 | Soybean | nucleus | 19.21 | 17.04 |
| KRH39195 | Soybean | nucleus | 20.9 | 15.42 |
| KRH37334 | Soybean | nucleus, plastid | 14.41 | 13.64 |
| KRH12328 | Soybean | plastid | 14.97 | 13.42 |
| KRH13468 | Soybean | cytosol | 2.26 | 8.08 |
Protein Annotations
| EMBL:ACUP02009931 | EnsemblPlants:KRH07084 | EnsemblPlantsGene:GLYMA_16G067000 | EntrezGene:100798231 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:CCT_domain |
| InterPro:IPR010402 | PANTHER:PTHR31874 | PANTHER:PTHR31874:SF18 | PFAM:PF06203 | PFscan:PS51017 | ProteinID:KRH07084 |
| ProteinID:KRH07084.1 | SEG:seg | UniParc:UPI0002950D59 | UniProt:I1MLR4 | MapMan:15.5.1.2 | : |
Description
hypothetical protein
Coordinates
chr16:-:6640311..6646267
Molecular Weight (calculated)
40144.2 Da
IEP (calculated)
10.083
GRAVY (calculated)
-1.069
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MCNKNSPSSS DIQATSIMKR TRKPNRRYHH NTTSSSSSSS SSSSSSSSST TSFKPHRRGN RTKTRKPKFV SLRLQLSDPK KKMKTTQPKP KPKPKPKAQQ
101: QEQQQQQPQL NLFPLHPDHH DMHEEQNVAL LFSSDGGATL NGLLEEETTT TEEGSMSVLT CPAEDTGNWL VRKAMRRRES EEGSEERWVC YSEVVEEKKE
201: AMEEVTSYCV TGETKTKTKT PSFGLLSLKL DHQGILNAWS DKGSLYVAAE EEEEGGPQTV PDIFNGFLFH NVAWDGLGSG GVVGNAWNVP ENCGANKTNV
301: KEEMGWKLGQ REASLQRYKE KRQSRLFYKK IRYEVRKLNA EKRPRMKGRF VKRE
101: QEQQQQQPQL NLFPLHPDHH DMHEEQNVAL LFSSDGGATL NGLLEEETTT TEEGSMSVLT CPAEDTGNWL VRKAMRRRES EEGSEERWVC YSEVVEEKKE
201: AMEEVTSYCV TGETKTKTKT PSFGLLSLKL DHQGILNAWS DKGSLYVAAE EEEEGGPQTV PDIFNGFLFH NVAWDGLGSG GVVGNAWNVP ENCGANKTNV
301: KEEMGWKLGQ REASLQRYKE KRQSRLFYKK IRYEVRKLNA EKRPRMKGRF VKRE
001: MCSNKASPVV GEEKQSTRSS KRIKKRKNRE ATTTMEDKSS SNLDASRKIR TKTKKPKFLS LKLELNTSHE INENPRSKKS KKKNNNKKQS KKKEPDTTPF
101: KEKKRAETTT TLGGGEKEEE QYDTVAAYLF NSATDSTISS IHDLLPSSAA TDVDCGGERN NLSPYDRQDH GSSSSSLLRT AMRKGASEEE ETTEERWVSY
201: SEVVEEVMSR SGTPRCCGGG DGNDGRPSLA LKLDYEQIME AWSDKGTLYV DGEPPQTVPD LHASADGFND GGEAGNLWAV PEMETTERLW RGHREASLLR
301: YKEKRQNRLF SKRIRYQVRK LNAEKRPRVK GRFVKREDS
101: KEKKRAETTT TLGGGEKEEE QYDTVAAYLF NSATDSTISS IHDLLPSSAA TDVDCGGERN NLSPYDRQDH GSSSSSLLRT AMRKGASEEE ETTEERWVSY
201: SEVVEEVMSR SGTPRCCGGG DGNDGRPSLA LKLDYEQIME AWSDKGTLYV DGEPPQTVPD LHASADGFND GGEAGNLWAV PEMETTERLW RGHREASLLR
301: YKEKRQNRLF SKRIRYQVRK LNAEKRPRVK GRFVKREDS
Arabidopsis Description
CCT motif family protein [Source:UniProtKB/TrEMBL;Acc:Q949T9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.