CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH07084	Soybean	plastid	83.62	83.62
Bra023461.1-P	Field mustard	cytosol	21.19	49.02
CDX70561	Canola	nucleus	20.62	48.34
VIT_14s0219g00220.t01	Wine grape	nucleus, plastid	40.68	46.45
HORVU2Hr1G056960.1	Barley	peroxisome	11.58	39.05
GSMUA_Achr11P...	Banana	nucleus	19.77	37.04
Solyc02g093590.2.1	Tomato	nucleus	32.77	36.25
CDX85600	Canola	nucleus	32.49	36.16
PGSC0003DMT400032849	Potato	nucleus	32.77	35.91
CDX69586	Canola	nucleus, plastid	33.05	35.45
CDY09849	Canola	nucleus	32.77	35.05
CDX91067	Canola	nucleus	31.64	34.67
AT5G14370.1	Thale cress	nucleus	33.05	34.51
CDX78575	Canola	nucleus	28.25	33.22
Bra006252.1-P	Field mustard	nucleus	28.25	33.22
GSMUA_Achr10P...	Banana	nucleus	26.84	32.99
KRH17099	Soybean	nucleus	18.64	30.0
KRH72745	Soybean	nucleus	18.93	29.13
Zm00001d049651_P001	Maize	mitochondrion, nucleus, peroxisome, plastid	21.47	28.04
KXG24303	Sorghum	mitochondrion, nucleus	23.16	27.8
TraesCS7D01G311500.1	Wheat	nucleus	22.6	27.59
TraesCS7A01G314300.1	Wheat	nucleus	22.88	27.18
TraesCS7B01G215100.1	Wheat	nucleus	22.32	26.78
Zm00001d035134_P001	Maize	plastid	18.36	24.34
Os08t0119700-00	Rice	plastid	24.29	24.29
Bra023462.1-P	Field mustard	nucleus	9.89	22.01
Bra008763.1-P	Field mustard	nucleus, plastid	32.49	21.5
HORVU7Hr1G074960.1	Barley	nucleus	11.86	18.58
HORVU7Hr1G074920.1	Barley	extracellular, mitochondrion	15.25	18.12
KRH60334	Soybean	nucleus	18.64	18.08
KRH41630	Soybean	nucleus	18.36	17.52
KRH48479	Soybean	nucleus	20.06	16.63
KRG90815	Soybean	nucleus	19.21	16.27
KRH35955	Soybean	nucleus	18.93	15.99
KRH02778	Soybean	nucleus, plastid	17.8	15.83
KRH19100	Soybean	nucleus	17.23	15.29
KRH39195	Soybean	nucleus	19.77	14.58
KRH12328	Soybean	plastid	14.69	13.16
KRH37334	Soybean	nucleus, plastid	13.56	12.83
KRH13468	Soybean	cytosol	2.26	8.08

Protein Annotations

EMBL:ACUP02011943	EnsemblPlants:KRG94369	EnsemblPlantsGene:GLYMA_19G079600	EntrezGene:100811815	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:CCT_domain
InterPro:IPR010402	PANTHER:PTHR31874	PANTHER:PTHR31874:SF18	PFAM:PF06203	PFscan:PS51017	ProteinID:KRG94369
ProteinID:KRG94369.1	SEG:seg	UniParc:UPI00023D9C87	UniProt:I1N7H8	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr19:+:28915936..28918649

Molecular Weight (calculated)

40049.3 Da

IEP (calculated)

10.180

GRAVY (calculated)

-0.867

Length

354 amino acids

Sequence
(BLAST)

001: MCNKNSPSSS DIQTTSIMKR TRKPNRRYYH NSSSSSSSSS STTSFKLHRR GNRTKTRKPK FVSLKLQLSE PKKKMASTKP KPKPKAEQLQ QQQQLQQQQQ
101: QQQPQLNLFP LHPDHHDMHE EQNMALLFSS DGGATLNGLL EEGSTTTTTT SVLTCPAEDT GNWLVRKAMR RRESEEGSEE RWVCYSEVVE EKKEAMEEVT
201: SYSVKGETKT TSFGFGLLSL KLDHQGILNA WSDKGSLYVA GEEEGALQTV PDIFNGFLFH NAVAPHVAWD GWGSGGVVGN AWSVHEECGA NKANVKEETS
301: WKLAQREASV QRYKEKRQSR LFSKRIRYEV RKLNAEKRPR MKVLLPTFVK GAIV

Best Arabidopsis Sequence Match ( AT5G14370.1 )
(BLAST)

001: MCSNKASPVV GEEKQSTRSS KRIKKRKNRE ATTTMEDKSS SNLDASRKIR TKTKKPKFLS LKLELNTSHE INENPRSKKS KKKNNNKKQS KKKEPDTTPF
101: KEKKRAETTT TLGGGEKEEE QYDTVAAYLF NSATDSTISS IHDLLPSSAA TDVDCGGERN NLSPYDRQDH GSSSSSLLRT AMRKGASEEE ETTEERWVSY
201: SEVVEEVMSR SGTPRCCGGG DGNDGRPSLA LKLDYEQIME AWSDKGTLYV DGEPPQTVPD LHASADGFND GGEAGNLWAV PEMETTERLW RGHREASLLR
301: YKEKRQNRLF SKRIRYQVRK LNAEKRPRVK GRFVKREDS

Arabidopsis Description

CCT motif family protein [Source:UniProtKB/TrEMBL;Acc:Q949T9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.