CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 5
cytosol 1
mitochondrion 1
nucleus 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH12328	Soybean	plastid	82.09	77.72
KRH02778	Soybean	nucleus, plastid	39.04	36.68
KRH19100	Soybean	nucleus	39.04	36.59
VIT_11s0103g00760.t01	Wine grape	plastid	39.84	35.73
CDY52734	Canola	nucleus, plastid	35.83	33.67
CDY38274	Canola	nucleus, plastid	35.03	33.0
Bra002752.1-P	Field mustard	nucleus, plastid	34.49	32.82
Bra013939.1-P	Field mustard	plastid	33.42	32.72
CDX89377	Canola	plastid	33.16	32.46
CDY42238	Canola	nucleus	33.42	32.38
AT4G25990.2	Thale cress	nucleus	34.76	31.78
CDX94392	Canola	plastid	32.62	31.77
Bra020461.1-P	Field mustard	nucleus	33.16	31.47
CDY47926	Canola	nucleus	32.89	31.38
Bra019134.1-P	Field mustard	plastid	31.82	31.07
PGSC0003DMT400059170	Potato	plastid	34.76	30.09
AT5G57180.2	Thale cress	nucleus, plastid	34.49	29.66
Solyc07g008540.2.1	Tomato	nucleus, plastid	34.22	29.63
CDX92740	Canola	plastid	31.02	29.22
GSMUA_Achr6P01780_001	Banana	nucleus	31.55	28.78
GSMUA_Achr10P...	Banana	nucleus	23.8	27.64
CDY42769	Canola	nucleus	16.58	26.61
GSMUA_Achr7P19660_001	Banana	mitochondrion	29.95	25.28
Os02t0148000-01	Rice	plastid	30.48	24.2
TraesCS6B01G146200.2	Wheat	plastid	31.28	23.68
EES04516	Sorghum	plastid	30.75	23.66
HORVU6Hr1G021460.2	Barley	plastid	30.75	23.47
TraesCS6D01G108000.1	Wheat	plastid	30.75	23.28
TraesCS6A01G118000.1	Wheat	plastid	30.48	23.17
Zm00001d053880_P001	Maize	plastid	29.14	23.04
Zm00001d015268_P001	Maize	plastid	28.07	22.25
Os06t0699600-01	Rice	plastid	27.27	21.89
Zm00001d014664_P001	Maize	plastid	23.8	20.46
TraesCS7B01G322600.1	Wheat	plastid	24.87	20.35
HORVU7Hr1G097630.2	Barley	cytosol, nucleus	15.78	20.0
TraesCS7D01G414400.2	Wheat	plastid	24.06	19.69
TraesCS7A01G422200.1	Wheat	nucleus, plastid	24.06	19.65
KRH17099	Soybean	nucleus	11.5	19.55
KXG20763	Sorghum	plastid	23.53	19.38
KRH72745	Soybean	nucleus	11.5	18.7
KRH60334	Soybean	nucleus	17.91	18.36
KRH41630	Soybean	nucleus	18.18	18.33
KRH48479	Soybean	nucleus	19.25	16.86
KRH13468	Soybean	cytosol	4.28	16.16
KRH35955	Soybean	nucleus	17.38	15.51
KRH39195	Soybean	nucleus	19.25	15.0
KRH07084	Soybean	plastid	13.64	14.41
KRG90815	Soybean	nucleus	16.04	14.35
KRG94369	Soybean	plastid	12.83	13.56

Protein Annotations

EMBL:ACUP02005437	EnsemblPlants:KRH37334	EnsemblPlantsGene:GLYMA_09G059800	EntrezGene:100783619	PANTHER:PTHR31874	PANTHER:PTHR31874:SF10
ProteinID:KRH37334	ProteinID:KRH37334.1	SEG:seg	UniParc:UPI00023CA3B7	UniProt:K7LC21	MapMan:35.1

Description

hypothetical protein

Coordinates

chr9:-:5521609..5523627

Molecular Weight (calculated)

41847.4 Da

IEP (calculated)

9.753

GRAVY (calculated)

-0.761

Length

374 amino acids

Sequence
(BLAST)

001: MSSSCGRTHG FNLDLAKSSS TSTLTSPTSS PSSTTTSETT NSPQSIIFTK KPRTLRKRPN QTFNEAATLL STAHPNLFSI KNLKKPEKFT KPVTENISHS
101: SEPLLLFREC ENNDNDAFSF LLESKRGFQT ESNKVFFGVR ENINKPCELS TSVPNCDEFE SEEFDCQSML DEEIEEGIDS IMGGGGGRVE EDDVNRAASC
201: HGGDGEKFGC VRALRRDDTK WWNFCVVDML QISPRMKHAA AEDLVPATAM ATTTEKTKTK NKKSKKVVKK LTEELSEVAV SKGLRLKLNY DGVRSAWSNR
301: GSPFADGSPG NDVTLRCSSL ARDLNKSKRK KDMSISWWRE GGVRKASVLR YKEKKQIRHQ FRIVNAHQRP RMKA

Best Arabidopsis Sequence Match ( AT5G57180.1 )
(BLAST)

001: MSACLSSGGG GAAAYSFELE KVKSPPPSSS TTTTRATSPS STISESSNSP LAISTRKPRT QRKRPNQTYN EAATLLSTAY PNIFSSNLSS KQKTHSSSNS
101: HFYGPLLSDN DDASDLLLPY ESIEEPDFLF HPTIQTKTEF FSDQKEVNSG GDCYGGEIEK FDFSDEFDAE SILDEDIEEG IDSIMGTVVE SNSNSGIYES
201: RVPGMINRGG RSSSNRIGKL EQMMMINSWN RSSNGFNFPL GLGLRSALRE NDDTKLWKIH TVDFEQISPR IQTVKTETAI STVDEEKSDG KKVVISGEKS
301: NKKKKKKKMT VTTTLITESK SLEDTEETSL KRTGPLLKLD YDGVLEAWSD KTSPFPDEIQ GSEAVDVNAR LAQIDLFGDS GMREASVLRY KEKRRTRLFS
401: KKIRYQVRKL NADQRPRMKV SNPS

Arabidopsis Description

CIA2CIA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UDY1]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.