Factsheet for TraesCS7A01G422200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G414400.2	Wheat	plastid	97.38	97.59
TraesCS7B01G322600.1	Wheat	plastid	94.54	94.75
HORVU7Hr1G097630.2	Barley	cytosol, nucleus	58.52	90.85
Os06t0699600-01	Rice	plastid	64.63	63.52
KXG20763	Sorghum	plastid	62.01	62.56
Zm00001d014664_P001	Maize	plastid	58.73	61.84
TraesCS6A01G118000.1	Wheat	plastid	55.9	52.03
GSMUA_Achr10P...	Banana	nucleus	28.82	40.99
GSMUA_Achr6P01780_001	Banana	nucleus	36.24	40.49
GSMUA_Achr7P19660_001	Banana	mitochondrion	37.55	38.83
KRH19100	Soybean	nucleus	30.35	34.84
KRH02778	Soybean	nucleus, plastid	29.91	34.42
VIT_11s0103g00760.t01	Wine grape	plastid	29.91	32.85
Bra019134.1-P	Field mustard	plastid	26.86	32.11
Solyc07g008540.2.1	Tomato	nucleus, plastid	29.91	31.71
PGSC0003DMT400059170	Potato	plastid	29.69	31.48
CDX92740	Canola	plastid	27.07	31.23
CDY38274	Canola	nucleus, plastid	27.07	31.23
CDY52734	Canola	nucleus, plastid	26.86	30.9
CDX94392	Canola	plastid	25.55	30.47
CDX89377	Canola	plastid	25.33	30.37
Bra013939.1-P	Field mustard	plastid	25.33	30.37
CDY47926	Canola	nucleus	25.98	30.36
CDY42238	Canola	nucleus	25.55	30.31
Bra020461.1-P	Field mustard	nucleus	25.98	30.2
Bra002752.1-P	Field mustard	nucleus, plastid	25.76	30.03
CDY42769	Canola	nucleus	15.07	29.61
AT5G57180.2	Thale cress	nucleus, plastid	27.95	29.43
AT4G25990.2	Thale cress	nucleus	26.2	29.34
KRH37334	Soybean	nucleus, plastid	19.65	24.06
KRH12328	Soybean	plastid	20.52	23.8
TraesCS4A01G268500.1	Wheat	nucleus, plastid	16.16	18.05
TraesCS6A01G293200.1	Wheat	nucleus	16.16	17.37
TraesCS7A01G314300.1	Wheat	nucleus	10.7	16.44
TraesCS7A01G206200.1	Wheat	nucleus	15.28	16.2

Protein Annotations

EnsemblPlants:TraesCS7A01G422200.1	EnsemblPlantsGene:TraesCS7A01G422200	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:CCT_domain
InterPro:IPR010402	PANTHER:PTHR31874	PANTHER:PTHR31874:SF7	PFAM:PF06203	PFscan:PS51017	SEG:seg
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr7A:-:612767504..612770630

Molecular Weight (calculated)

47786.9 Da

IEP (calculated)

8.038

GRAVY (calculated)

-0.322

Length

458 amino acids

Sequence
(BLAST)

001: MACIPTGIRL PDLDMVKAAA AAAGAGVGPP GAGPPGAGPL RPAHSSASSA LSDASNSSSA SSLSLKRART PRKRPNQTYN EAAALLASMY PSVFPAAPPS
101: PRLLGLASAL ADDPSRADLL PPFPVLGNAA CLLRDAAAPP PMTPRSPVLA RACPSPAAVS SAFTELRDSA PSPGTPDGAG ADGPGELDFE DDDDSFDADS
201: FLLGGVDEGA AAQGIDGIMG KLSMESGSDA SSINRVLSSS GIDPYIRNLM VLGLGFRRSR SNIKQALKRH DDDSEWWMCP AIPLKDIMPV PPPSMEPPPP
301: VEKKKKKTKK KALKDIAAGP CITCVKEEIP DPAYGDDGIF GLKAPKTGLG LSLNTEEVLK AWYDRGSVFS DGNIPDASST DGLAKLSDIE LFLENGAAGA
401: IREGSVQKLK HKQKQCTPLL SNKTRYQARK VHAESRPRVK GRFVSQAALL QKAAEKET

Best Arabidopsis Sequence Match ( AT5G57180.2 )
(BLAST)

001: MSACLSSGGG GAAAYSFELE KVKSPPPSSS TTTTRATSPS STISESSNSP LAISTRKPRT QRKRPNQTYN EAATLLSTAY PNIFSSNLSS KQKTHSSSNS
101: HFYGPLLSDN DDASDLLLPY ESIEEPDFLF HPTIQTKTEF FSDQKEVNSG GDCYGGEIEK FDFSDEFDAE SILDEDIEEG IDSIMGTVVE SNSNSGIYES
201: RVPGMINRGG RSSSNRIGKL EQMMMINSWN RSSNGFNFPL GLGLRSALRE NDDTKLWKIH TVDFEQISPR IQTVKTETAI STVDEEKSDG KKVVISGEKS
301: NKKKKKKKMT VTTTLITESK SLEDTEETSL KRTGPLLKLD YDGVLEAWSD KTSPFPDEIQ GSEAVDVNAR LAQIDLFGDS GMREASVLRY KEKRRTRLFS
401: KKIRYQVRKL NADQRPRMKG RFVRRPNEST PSGQR

Arabidopsis Description

CIA2CIA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UDY1]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.