CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH37334	Soybean	nucleus, plastid	77.72	82.09
KRH19100	Soybean	nucleus	36.71	36.34
KRH02778	Soybean	nucleus, plastid	36.2	35.93
VIT_11s0103g00760.t01	Wine grape	plastid	36.71	34.77
Bra013939.1-P	Field mustard	plastid	31.65	32.72
CDX89377	Canola	plastid	31.65	32.72
CDX94392	Canola	plastid	31.14	32.03
CDY52734	Canola	nucleus, plastid	31.9	31.66
CDY42238	Canola	nucleus	30.89	31.61
CDY38274	Canola	nucleus, plastid	31.65	31.49
Bra002752.1-P	Field mustard	nucleus, plastid	31.14	31.3
Bra019134.1-P	Field mustard	plastid	30.13	31.07
AT4G25990.2	Thale cress	nucleus	31.9	30.81
Bra020461.1-P	Field mustard	nucleus	30.63	30.71
CDY47926	Canola	nucleus	30.38	30.61
PGSC0003DMT400059170	Potato	plastid	31.9	29.17
CDX92740	Canola	plastid	29.11	28.97
AT5G57180.2	Thale cress	nucleus, plastid	31.9	28.97
Solyc07g008540.2.1	Tomato	nucleus, plastid	31.65	28.94
GSMUA_Achr6P01780_001	Banana	nucleus	29.62	28.54
GSMUA_Achr10P...	Banana	nucleus	23.04	28.26
CDY42769	Canola	nucleus	15.7	26.61
GSMUA_Achr7P19660_001	Banana	mitochondrion	28.35	25.28
Os02t0148000-01	Rice	plastid	28.86	24.2
HORVU6Hr1G021460.2	Barley	plastid	29.62	23.88
EES04516	Sorghum	plastid	29.37	23.87
TraesCS6B01G146200.2	Wheat	plastid	29.62	23.68
TraesCS6A01G118000.1	Wheat	plastid	29.37	23.58
TraesCS6D01G108000.1	Wheat	plastid	29.37	23.48
Zm00001d053880_P001	Maize	plastid	27.85	23.26
Zm00001d015268_P001	Maize	plastid	27.34	22.88
Os06t0699600-01	Rice	plastid	26.33	22.32
TraesCS7B01G322600.1	Wheat	plastid	25.06	21.66
KRH17099	Soybean	nucleus	11.9	21.36
HORVU7Hr1G097630.2	Barley	cytosol, nucleus	15.7	21.02
TraesCS7D01G414400.2	Wheat	plastid	24.05	20.79
TraesCS7A01G422200.1	Wheat	nucleus, plastid	23.8	20.52
Zm00001d014664_P001	Maize	plastid	22.53	20.46
KRH72745	Soybean	nucleus	11.9	20.43
KXG20763	Sorghum	plastid	23.29	20.26
KRH41630	Soybean	nucleus	16.2	17.25
KRH60334	Soybean	nucleus	15.7	16.99
KRH07084	Soybean	plastid	13.42	14.97
KRH48479	Soybean	nucleus	15.95	14.75
KRG94369	Soybean	plastid	13.16	14.69
KRH35955	Soybean	nucleus	15.44	14.56
KRH13468	Soybean	cytosol	3.29	13.13
KRH39195	Soybean	nucleus	15.95	13.12
KRG90815	Soybean	nucleus	13.67	12.92

Protein Annotations

EMBL:ACUP02009292	EnsemblPlants:KRH12328	EnsemblPlantsGene:GLYMA_15G166500	EntrezGene:102670319	PANTHER:PTHR31874	PANTHER:PTHR31874:SF10
ProteinID:KRH12328	ProteinID:KRH12328.1	SEG:seg	UniParc:UPI00023D1F47	UniProt:K7MBU5	MapMan:35.1

Description

hypothetical protein

Coordinates

chr15:-:14470214..14472833

Molecular Weight (calculated)

44687.6 Da

IEP (calculated)

9.136

GRAVY (calculated)

-0.824

Length

395 amino acids

Sequence
(BLAST)

001: MSSSCGRTCG FNLDFAKSSS TSTLTSPTSS PSSTTTSETT NSPQSIIFRK KPRTLRKRPN QTFNEAATLL STAHPNLFST KNLKNPEKFT KPIITEYNDS
101: SEPLLLFRDY ENSDNDNDAF SFLLERKRSF QTEPNKAFFS VRENINKPCE LSTKVVNCDK LDLESEEFDC ESMLDEEIEE GIDGIMRGRT VQKDDTNCTE
201: CHIGLKQRSQ SPLYHPSCHC GDGGKFGWVR TLRGVGEDDD TKWWNFCVVD MLQISPRMKH AAAEDLVPAT TTTTTKKKAK NKKNKKDLVK ELLPEEVAVS
301: QGLLLKLNYD DVRNAWSDRG SPFADGSPGN DVTLSCSSLA RDLKSKRKKD RSISSWMEGG VRKKSGLRYK EKKQIRHQFW IVNAHQRPRI KARLS

Best Arabidopsis Sequence Match ( AT5G57180.2 )
(BLAST)

001: MSACLSSGGG GAAAYSFELE KVKSPPPSSS TTTTRATSPS STISESSNSP LAISTRKPRT QRKRPNQTYN EAATLLSTAY PNIFSSNLSS KQKTHSSSNS
101: HFYGPLLSDN DDASDLLLPY ESIEEPDFLF HPTIQTKTEF FSDQKEVNSG GDCYGGEIEK FDFSDEFDAE SILDEDIEEG IDSIMGTVVE SNSNSGIYES
201: RVPGMINRGG RSSSNRIGKL EQMMMINSWN RSSNGFNFPL GLGLRSALRE NDDTKLWKIH TVDFEQISPR IQTVKTETAI STVDEEKSDG KKVVISGEKS
301: NKKKKKKKMT VTTTLITESK SLEDTEETSL KRTGPLLKLD YDGVLEAWSD KTSPFPDEIQ GSEAVDVNAR LAQIDLFGDS GMREASVLRY KEKRRTRLFS
401: KKIRYQVRKL NADQRPRMKG RFVRRPNEST PSGQR

Arabidopsis Description

CIA2CIA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UDY1]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.