Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G414400.2 | Wheat | plastid | 91.86 | 59.3 |
| TraesCS7B01G322600.1 | Wheat | plastid | 90.85 | 58.64 |
| TraesCS7A01G422200.1 | Wheat | nucleus, plastid | 90.85 | 58.52 |
| Os06t0699600-01 | Rice | plastid | 60.68 | 38.41 |
| KXG20763 | Sorghum | plastid | 56.61 | 36.78 |
| Zm00001d014664_P001 | Maize | plastid | 54.24 | 36.78 |
| HORVU6Hr1G021460.2 | Barley | plastid | 50.85 | 30.61 |
| CDY42769 | Canola | nucleus | 21.69 | 27.47 |
| GSMUA_Achr6P01780_001 | Banana | nucleus | 36.61 | 26.34 |
| GSMUA_Achr7P19660_001 | Banana | mitochondrion | 35.59 | 23.7 |
| HORVU2Hr1G056960.1 | Barley | peroxisome | 7.8 | 21.9 |
| KRH19100 | Soybean | nucleus | 28.81 | 21.3 |
| GSMUA_Achr10P... | Banana | nucleus | 23.05 | 21.12 |
| KRH02778 | Soybean | nucleus, plastid | 28.47 | 21.11 |
| Bra019134.1-P | Field mustard | plastid | 27.12 | 20.89 |
| CDY42238 | Canola | nucleus | 27.12 | 20.73 |
| VIT_11s0103g00760.t01 | Wine grape | plastid | 29.15 | 20.62 |
| CDY47926 | Canola | nucleus | 27.12 | 20.41 |
| CDX92740 | Canola | plastid | 27.12 | 20.15 |
| Solyc07g008540.2.1 | Tomato | nucleus, plastid | 29.49 | 20.14 |
| Bra020461.1-P | Field mustard | nucleus | 26.78 | 20.05 |
| PGSC0003DMT400059170 | Potato | plastid | 29.15 | 19.91 |
| CDY38274 | Canola | nucleus, plastid | 26.78 | 19.9 |
| CDY52734 | Canola | nucleus, plastid | 26.78 | 19.85 |
| AT5G57180.2 | Thale cress | nucleus, plastid | 28.81 | 19.54 |
| CDX89377 | Canola | plastid | 25.08 | 19.37 |
| CDX94392 | Canola | plastid | 25.08 | 19.27 |
| Bra013939.1-P | Field mustard | plastid | 24.75 | 19.11 |
| Bra002752.1-P | Field mustard | nucleus, plastid | 25.42 | 19.08 |
| AT4G25990.2 | Thale cress | nucleus | 26.1 | 18.83 |
| KRH37334 | Soybean | nucleus, plastid | 20.0 | 15.78 |
| KRH12328 | Soybean | plastid | 21.02 | 15.7 |
| HORVU4Hr1G007420.1 | Barley | nucleus, plastid | 15.93 | 11.46 |
| HORVU6Hr1G073170.1 | Barley | nucleus | 17.63 | 10.44 |
| HORVU7Hr1G074960.1 | Barley | nucleus | 7.46 | 9.73 |
| HORVU7Hr1G074920.1 | Barley | extracellular, mitochondrion | 9.83 | 9.73 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G097630.2 | EnsemblPlantsGene:HORVU7Hr1G097630 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:CCT_domain |
| InterPro:IPR010402 | PANTHER:PTHR31874 | PANTHER:PTHR31874:SF7 | PFAM:PF06203 | SEG:seg | UniParc:UPI000B4811C6 |
| UniProt:A0A287XHY7 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:592902777..592905464
Molecular Weight (calculated)
31650.5 Da
IEP (calculated)
6.305
GRAVY (calculated)
-0.500
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: FRDSAPSPGT PDGAAGADGP GELDFEDDDD SFDADSFLLG GADEGAAAEG IDGIMGKLSM ENGSDASTIN RVLSSSGIDP YIRNLMVLGL GFRRSRSNIK
101: QALKRQDDDS EWWMCPAIPL KDIMPVPPPS MAPPPPPVEK KKKKTKKKAL KDIAAGPCIT CLKEEIPDPA YGDDGIFGLK APKTGLGLSL NTEEVLKAWY
201: DRGSVFADGN IPDASSADWL AKLSDIELFL ENGAAGAIRE GSVQKLKHKQ KQCTPLLSNK TRYQARKVHA ESRPRVKAST RTHSRALGLP SSVVY
101: QALKRQDDDS EWWMCPAIPL KDIMPVPPPS MAPPPPPVEK KKKKTKKKAL KDIAAGPCIT CLKEEIPDPA YGDDGIFGLK APKTGLGLSL NTEEVLKAWY
201: DRGSVFADGN IPDASSADWL AKLSDIELFL ENGAAGAIRE GSVQKLKHKQ KQCTPLLSNK TRYQARKVHA ESRPRVKAST RTHSRALGLP SSVVY
001: MSACLSSGGG GAAAYSFELE KVKSPPPSSS TTTTRATSPS STISESSNSP LAISTRKPRT QRKRPNQTYN EAATLLSTAY PNIFSSNLSS KQKTHSSSNS
101: HFYGPLLSDN DDASDLLLPY ESIEEPDFLF HPTIQTKTEF FSDQKEVNSG GDCYGGEIEK FDFSDEFDAE SILDEDIEEG IDSIMGTVVE SNSNSGIYES
201: RVPGMINRGG RSSSNRIGKL EQMMMINSWN RSSNGFNFPL GLGLRSALRE NDDTKLWKIH TVDFEQISPR IQTVKTETAI STVDEEKSDG KKVVISGEKS
301: NKKKKKKKMT VTTTLITESK SLEDTEETSL KRTGPLLKLD YDGVLEAWSD KTSPFPDEIQ GSEAVDVNAR LAQIDLFGDS GMREASVLRY KEKRRTRLFS
401: KKIRYQVRKL NADQRPRMKV SNPS
101: HFYGPLLSDN DDASDLLLPY ESIEEPDFLF HPTIQTKTEF FSDQKEVNSG GDCYGGEIEK FDFSDEFDAE SILDEDIEEG IDSIMGTVVE SNSNSGIYES
201: RVPGMINRGG RSSSNRIGKL EQMMMINSWN RSSNGFNFPL GLGLRSALRE NDDTKLWKIH TVDFEQISPR IQTVKTETAI STVDEEKSDG KKVVISGEKS
301: NKKKKKKKMT VTTTLITESK SLEDTEETSL KRTGPLLKLD YDGVLEAWSD KTSPFPDEIQ GSEAVDVNAR LAQIDLFGDS GMREASVLRY KEKRRTRLFS
401: KKIRYQVRKL NADQRPRMKV SNPS
Arabidopsis Description
CIA2CIA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UDY1]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.