CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 4
nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02778	Soybean	nucleus, plastid	94.24	94.47
VIT_11s0103g00760.t01	Wine grape	plastid	61.9	59.23
PGSC0003DMT400059170	Potato	plastid	54.89	50.69
Solyc07g008540.2.1	Tomato	nucleus, plastid	54.14	50.0
CDY52734	Canola	nucleus, plastid	46.12	46.23
CDY38274	Canola	nucleus, plastid	45.86	46.1
Bra013939.1-P	Field mustard	plastid	43.86	45.81
CDX89377	Canola	plastid	43.86	45.81
CDY42238	Canola	nucleus	44.11	45.6
CDY47926	Canola	nucleus	44.61	45.41
Bra020461.1-P	Field mustard	nucleus	44.61	45.18
Bra002752.1-P	Field mustard	nucleus, plastid	43.86	44.53
CDX94392	Canola	plastid	42.61	44.27
GSMUA_Achr6P01780_001	Banana	nucleus	45.36	44.15
GSMUA_Achr10P...	Banana	nucleus	34.59	42.86
Bra019134.1-P	Field mustard	plastid	40.85	42.56
CDX92740	Canola	plastid	41.85	42.07
AT5G57180.2	Thale cress	nucleus, plastid	45.61	41.84
AT4G25990.2	Thale cress	nucleus	42.86	41.81
GSMUA_Achr7P19660_001	Banana	mitochondrion	45.11	40.63
KRH37334	Soybean	nucleus, plastid	36.59	39.04
KRH12328	Soybean	plastid	36.34	36.71
EES04516	Sorghum	plastid	43.61	35.8
CDY42769	Canola	nucleus	20.8	35.62
HORVU6Hr1G021460.2	Barley	plastid	42.36	34.49
Os02t0148000-01	Rice	plastid	40.6	34.39
TraesCS6D01G108000.1	Wheat	plastid	42.11	34.01
TraesCS6A01G118000.1	Wheat	plastid	41.85	33.94
Zm00001d053880_P001	Maize	plastid	40.1	33.83
TraesCS6B01G146200.2	Wheat	plastid	41.85	33.81
Zm00001d015268_P001	Maize	plastid	39.35	33.26
Os06t0699600-01	Rice	plastid	36.34	31.12
TraesCS7D01G414400.2	Wheat	plastid	34.84	30.42
TraesCS7A01G422200.1	Wheat	nucleus, plastid	34.84	30.35
TraesCS7B01G322600.1	Wheat	plastid	34.34	29.98
HORVU7Hr1G097630.2	Barley	cytosol, nucleus	21.3	28.81
Zm00001d014664_P001	Maize	plastid	30.83	28.28
KXG20763	Sorghum	plastid	31.08	27.31
KRH17099	Soybean	nucleus	15.04	27.27
KRH72745	Soybean	nucleus	14.04	24.35
KRH60334	Soybean	nucleus	20.3	22.19
KRH41630	Soybean	nucleus	19.8	21.29
KRH48479	Soybean	nucleus	21.05	19.67
KRH07084	Soybean	plastid	17.04	19.21
KRH35955	Soybean	nucleus	19.8	18.85
KRG90815	Soybean	nucleus	19.05	18.18
KRG94369	Soybean	plastid	15.29	17.23
KRH39195	Soybean	nucleus	20.05	16.67
KRH13468	Soybean	cytosol	3.51	14.14

Protein Annotations

EntrezGene:100784788	MapMan:15.5.1.2	EMBL:ACUP02008169	InterPro:CCT_domain	EnsemblPlantsGene:GLYMA_13G100700	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
UniProt:I1LVL9	InterPro:IPR010402	EnsemblPlants:KRH19100	ProteinID:KRH19100	ProteinID:KRH19100.1	ProteinID:KRH19101.1
PFAM:PF06203	PFscan:PS51017	PANTHER:PTHR31874	PANTHER:PTHR31874:SF10	UniParc:UPI000233ADD6	SEG:seg

Description

hypothetical protein

Coordinates

chr13:-:21588821..21592548

Molecular Weight (calculated)

44468.4 Da

IEP (calculated)

9.782

GRAVY (calculated)

-0.703

Length

399 amino acids

Sequence
(BLAST)

001: MSSSCLSGAG GRTYGFDFEF VKSPSSSTFT SHTSSSPSST ISESSNSPLA ISTKKPRTPR KRPNQTYNEA AALLSTAYPN LFSTKNLKTQ GKGKFSRPTS
101: ENFDYESSEP LLPFRVFDGT ASCFLLDQTG PKPIMERPKV VSVQEKENNN NKACESPGEI SSIVNFNSVE LNDDGEESLD AESILDEEIE EGIDSIMGSS
201: IQEVSNDAVS NLPWIMPFDG KLEFPRPRVR ALRHVEDGNW WNFPAVDILS ISPKINTKPP PVAAEKKMKK KKKVATPAEK TVVVELKNAE LPKPKQGLML
301: KLNYDDVRNA WSDRGTPFSD DSPLADVPGN DVTARLSQID LLWDNGGVRE ASVLRYKEKR RTRLFSKKIR YQVRKVNADR RPRMKGRFVR RLNSSANAH

Best Arabidopsis Sequence Match ( AT5G57180.2 )
(BLAST)

001: MSACLSSGGG GAAAYSFELE KVKSPPPSSS TTTTRATSPS STISESSNSP LAISTRKPRT QRKRPNQTYN EAATLLSTAY PNIFSSNLSS KQKTHSSSNS
101: HFYGPLLSDN DDASDLLLPY ESIEEPDFLF HPTIQTKTEF FSDQKEVNSG GDCYGGEIEK FDFSDEFDAE SILDEDIEEG IDSIMGTVVE SNSNSGIYES
201: RVPGMINRGG RSSSNRIGKL EQMMMINSWN RSSNGFNFPL GLGLRSALRE NDDTKLWKIH TVDFEQISPR IQTVKTETAI STVDEEKSDG KKVVISGEKS
301: NKKKKKKKMT VTTTLITESK SLEDTEETSL KRTGPLLKLD YDGVLEAWSD KTSPFPDEIQ GSEAVDVNAR LAQIDLFGDS GMREASVLRY KEKRRTRLFS
401: KKIRYQVRKL NADQRPRMKG RFVRRPNEST PSGQR

Arabidopsis Description

CIA2CIA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UDY1]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.