Factsheet for GSMUA_Achr7P19660_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
nucleus 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus	53.5	73.6
GSMUA_Achr6P01780_001	Banana	nucleus	67.04	72.44
VIT_11s0103g00760.t01	Wine grape	plastid	43.12	45.8
EES04516	Sorghum	plastid	49.89	45.47
KRH19100	Soybean	nucleus	40.63	45.11
TraesCS6A01G118000.1	Wheat	plastid	49.21	44.31
HORVU6Hr1G021460.2	Barley	plastid	48.98	44.29
Zm00001d015268_P001	Maize	plastid	47.18	44.28
TraesCS6B01G146200.2	Wheat	plastid	49.21	44.13
TraesCS6D01G108000.1	Wheat	plastid	49.21	44.13
KRH02778	Soybean	nucleus, plastid	39.28	43.72
Os02t0148000-01	Rice	plastid	45.37	42.68
PGSC0003DMT400059170	Potato	plastid	41.08	42.13
Zm00001d053880_P001	Maize	plastid	44.7	41.86
Bra019134.1-P	Field mustard	plastid	35.67	41.25
Solyc07g008540.2.1	Tomato	nucleus, plastid	40.18	41.2
CDY52734	Canola	nucleus, plastid	36.79	40.95
CDY38274	Canola	nucleus, plastid	36.34	40.55
CDY42238	Canola	nucleus	34.76	39.9
Bra002752.1-P	Field mustard	nucleus, plastid	35.21	39.69
CDY47926	Canola	nucleus	34.99	39.54
Bra020461.1-P	Field mustard	nucleus	34.99	39.34
CDX89377	Canola	plastid	33.63	39.01
Bra013939.1-P	Field mustard	plastid	33.63	39.01
CDX92740	Canola	plastid	34.54	38.54
Os06t0699600-01	Rice	plastid	39.73	37.77
CDX94392	Canola	plastid	32.73	37.76
AT5G57180.2	Thale cress	nucleus, plastid	37.02	37.7
TraesCS7D01G414400.2	Wheat	plastid	38.83	37.64
TraesCS7B01G322600.1	Wheat	plastid	38.83	37.64
TraesCS7A01G422200.1	Wheat	nucleus, plastid	38.83	37.55
CDY42769	Canola	nucleus	19.41	36.91
AT4G25990.2	Thale cress	nucleus	33.86	36.67
Zm00001d014664_P001	Maize	plastid	34.99	35.63
HORVU7Hr1G097630.2	Barley	cytosol, nucleus	23.7	35.59
KXG20763	Sorghum	plastid	35.44	34.58
KRH37334	Soybean	nucleus, plastid	25.28	29.95
KRH12328	Soybean	plastid	25.28	28.35
GSMUA_Achr11P...	Banana	nucleus	11.29	26.45
GSMUA_Achr4P30670_001	Banana	nucleus	18.06	21.8
GSMUA_Achr10P...	Banana	nucleus	13.77	21.18
GSMUA_Achr7P12560_001	Banana	nucleus	15.35	20.42
GSMUA_Achr10P...	Banana	nucleus	16.03	20.23
GSMUA_Achr7P18710_001	Banana	plastid	17.16	20.05
GSMUA_Achr10P...	Banana	nucleus	17.16	19.9

Protein Annotations

EnsemblPlants:GSMUA_Achr7P19660_001	EnsemblPlants:GSMUA_Achr7T19660_001	EnsemblPlantsGene:GSMUA_Achr7G19660_001	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:CCT_domain	InterPro:IPR010402
PANTHER:PTHR31874	PANTHER:PTHR31874:SF10	PFAM:PF06203	PFscan:PS51017	SEG:seg	UniParc:UPI000295FBB1
UniProt:M0TJ03	MapMan:35.1	:	:	:	:

Description

Putative Protein CHLOROPLAST IMPORT APPARATUS 2 [Source:GMGC_GENE;Acc:GSMUA_Achr7G19660_001]

Coordinates

chr7:+:22597857..22599809

Molecular Weight (calculated)

48369.4 Da

IEP (calculated)

10.135

GRAVY (calculated)

-0.588

Length

443 amino acids

Sequence
(BLAST)

001: MLRLRPRLLV LRSGIAVQVR LLQGTMSSCL SGGGGGRTYG FDLDIVKPSS SSSGRSLHSS SPSSTLSESS NSPRAISIKK ARTPRKRPNQ TYNEAAALLS
101: AIYPNIFSSK SLKKLSKDTK PFDSFPETSD LLPPFPVLSD AAFLIHNPQP EMPAATRLEL KYKMPIEKEC TSPVSSVSFE PNSPDPFDDN FDAESILDGE
201: VEESIDSIMG NLTMNVPSED NNNEGLNTCN ASVNPMLHSL IGYRTCGRFE LGLGLRFGRN LQRALRNRDE GDWWRSPAVP VQDLVPNLKS ATAAPAPAPA
301: PEKKKKKKAA KEETGGMKNT TNATSTPSKE AGLGLKLNHE EVLKAWSGRG SMFSDGPDTP SSSADALAKL ADIDLFPDAT GAGTVREASV LRYREKRRSR
401: LFSKKIRYQV RKANADRRPR MKASGRFVRS PSLLQQAIEE ESQ

Best Arabidopsis Sequence Match ( AT5G57180.2 )
(BLAST)

001: MSACLSSGGG GAAAYSFELE KVKSPPPSSS TTTTRATSPS STISESSNSP LAISTRKPRT QRKRPNQTYN EAATLLSTAY PNIFSSNLSS KQKTHSSSNS
101: HFYGPLLSDN DDASDLLLPY ESIEEPDFLF HPTIQTKTEF FSDQKEVNSG GDCYGGEIEK FDFSDEFDAE SILDEDIEEG IDSIMGTVVE SNSNSGIYES
201: RVPGMINRGG RSSSNRIGKL EQMMMINSWN RSSNGFNFPL GLGLRSALRE NDDTKLWKIH TVDFEQISPR IQTVKTETAI STVDEEKSDG KKVVISGEKS
301: NKKKKKKKMT VTTTLITESK SLEDTEETSL KRTGPLLKLD YDGVLEAWSD KTSPFPDEIQ GSEAVDVNAR LAQIDLFGDS GMREASVLRY KEKRRTRLFS
401: KKIRYQVRKL NADQRPRMKG RFVRRPNEST PSGQR

Arabidopsis Description

CIA2CIA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UDY1]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.