Factsheet for Bra019134.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92740	Canola	plastid	90.6	87.41
Bra013939.1-P	Field mustard	plastid	71.54	71.73
AT4G25990.2	Thale cress	nucleus	67.36	63.08
Bra002752.1-P	Field mustard	nucleus, plastid	54.83	53.44
Bra020461.1-P	Field mustard	nucleus	53.0	51.52
VIT_11s0103g00760.t01	Wine grape	plastid	47.78	43.88
KRH02778	Soybean	nucleus, plastid	43.08	41.46
PGSC0003DMT400059170	Potato	plastid	46.21	40.97
KRH19100	Soybean	nucleus	42.56	40.85
Solyc07g008540.2.1	Tomato	nucleus, plastid	45.43	40.28
GSMUA_Achr6P01780_001	Banana	nucleus	40.99	38.29
GSMUA_Achr7P19660_001	Banana	mitochondrion	41.25	35.67
GSMUA_Achr10P...	Banana	nucleus	28.72	34.16
KRH37334	Soybean	nucleus, plastid	31.07	31.82
Bra023461.1-P	Field mustard	cytosol	12.53	31.37
EES04516	Sorghum	plastid	39.43	31.07
KRH12328	Soybean	plastid	31.07	30.13
HORVU6Hr1G021460.2	Barley	plastid	38.38	30.0
TraesCS6A01G118000.1	Wheat	plastid	38.12	29.67
TraesCS6B01G146200.2	Wheat	plastid	38.12	29.55
TraesCS6D01G108000.1	Wheat	plastid	38.12	29.55
Os02t0148000-01	Rice	plastid	36.03	29.3
Zm00001d015268_P001	Maize	plastid	36.03	29.24
Zm00001d053880_P001	Maize	plastid	35.77	28.96
HORVU7Hr1G097630.2	Barley	cytosol, nucleus	20.89	27.12
TraesCS7D01G414400.2	Wheat	plastid	32.11	26.91
TraesCS7A01G422200.1	Wheat	nucleus, plastid	32.11	26.86
TraesCS7B01G322600.1	Wheat	plastid	31.85	26.7
Bra015548.1-P	Field mustard	nucleus	13.84	26.11
Os06t0699600-01	Rice	plastid	31.59	25.97
Zm00001d014664_P001	Maize	plastid	28.2	24.83
KXG20763	Sorghum	plastid	28.46	24.01
Bra006252.1-P	Field mustard	nucleus	16.19	20.6
Bra032273.1-P	Field mustard	nucleus	15.4	18.79
Bra012475.1-P	Field mustard	nucleus	18.8	17.65
Bra024750.1-P	Field mustard	nucleus	19.06	17.63
Bra033925.1-P	Field mustard	nucleus	18.28	17.46
Bra010994.1-P	Field mustard	nucleus	16.19	15.23
Bra004035.1-P	Field mustard	nucleus	16.71	13.5
Bra008763.1-P	Field mustard	nucleus, plastid	16.19	11.59
Bra023462.1-P	Field mustard	nucleus	2.61	6.29

Protein Annotations

MapMan:15.5.1.2	EnsemblPlantsGene:Bra019134	EnsemblPlants:Bra019134.1	EnsemblPlants:Bra019134.1-P	InterPro:CCT_domain	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
InterPro:IPR010402	UniProt:M4DRJ1	PFAM:PF06203	PFscan:PS51017	PANTHER:PTHR31874	PANTHER:PTHR31874:SF10
UniParc:UPI0002541156	SEG:seg	:	:	:	:

Description

AT4G25990 (E=5e-044) CIL | CIL

Coordinates

chrA03:-:26145861..26147506

Molecular Weight (calculated)

42961.3 Da

IEP (calculated)

6.551

GRAVY (calculated)

-0.678

Length

383 amino acids

Sequence
(BLAST)

001: MSSCLSGGAT YTLKTMKSPP SRAASTHNTP SPSSTISESN SPPFTISTRR PRTRRKRPNQ TYNEAAALLS TAYPNIFSSM RNTLSPGTKS PLSDYDEASQ
101: LLLPFETIDE VFNPAIQTEP YQFLEKREFS FNSEVTRFEL LDDFDAESII LDDEEIEEGI DSFMGSNESN DGECTTMPWY RSSIGFSSPG NFPLGLGLRS
201: SLREEDDDDD GSLCRYPTVE LKHISPRIQT TTTAAALTDD VAVDSIKSKK KKTKKKKKVA AAAAESRSVE DLTTEKRVST FLKLDYDRVL EAWSDKESPF
301: SDEILGSHAT GIDIHTMLAE IDLFGESGMR EASVLRYKEK RMNRLFSNSK QIRYQVRKLS ADQRPRMKGR FVRRPNVRSL SGL

Best Arabidopsis Sequence Match ( AT4G25990.1 )
(BLAST)

001: MSSCAYSFEL EMMKSPPSNN TPSPSSTISE TNSPPFSIST RRPRTPRKRP NQTYDEAAAL LSTAYPKIFS SKKAKTQIFG TNKSPLSDYD EASQLLLPYV
101: SIEENEFLFN PTIPTKTEHF LEQKEVSFDD LEVNGFGVLD DFDAESILDE EIEEGIDSFM GNIESNDGDR ENCYRVGRLE EIMKNAWNGR FRLGLGLRSS
201: LRQNNDENWW KFPTVEFDQI SPRIQTTAAA AADDGQSNVV DSSKIKTIVT AEGDKKKKKK KKKKKVAPAA AESKSSEVTD SNPKLEQRVS PLLKLDYDGV
301: LEAWSGKESP FSDEILGSDA DGVDFHVRLG EIDLFGESGM REASVLRYKE KRRNRLFSKK IRYQVRKLNA DQRPRMKGRF VRRPNARNLS GLRL

Arabidopsis Description

CILCCT motif family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVJ8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.