Factsheet for Os02t0148000-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04516	Sorghum	plastid	82.59	80.04
Zm00001d053880_P001	Maize	plastid	78.56	78.22
HORVU6Hr1G021460.2	Barley	plastid	80.47	77.35
TraesCS6A01G118000.1	Wheat	plastid	80.47	77.03
TraesCS6B01G146200.2	Wheat	plastid	80.68	76.92
TraesCS6D01G108000.1	Wheat	plastid	80.25	76.52
Os06t0699600-01	Rice	plastid	52.23	52.79
GSMUA_Achr6P01780_001	Banana	nucleus	43.1	49.51
GSMUA_Achr7P19660_001	Banana	mitochondrion	42.68	45.37
GSMUA_Achr10P...	Banana	nucleus	29.72	43.48
KRH02778	Soybean	nucleus, plastid	34.39	40.7
KRH19100	Soybean	nucleus	34.39	40.6
VIT_11s0103g00760.t01	Wine grape	plastid	34.39	38.85
PGSC0003DMT400059170	Potato	plastid	35.03	38.19
Solyc07g008540.2.1	Tomato	nucleus, plastid	35.03	38.19
CDY42769	Canola	nucleus	18.05	36.48
Bra019134.1-P	Field mustard	plastid	29.3	36.03
Bra002752.1-P	Field mustard	nucleus, plastid	29.72	35.62
CDX89377	Canola	plastid	28.87	35.6
CDY38274	Canola	nucleus, plastid	29.94	35.52
Bra013939.1-P	Field mustard	plastid	28.66	35.34
CDY52734	Canola	nucleus, plastid	29.72	35.18
AT4G25990.2	Thale cress	nucleus	30.15	34.72
CDX94392	Canola	plastid	28.24	34.64
CDX92740	Canola	plastid	28.87	34.26
CDY42238	Canola	nucleus	27.81	33.94
CDY47926	Canola	nucleus	28.24	33.93
AT5G57180.2	Thale cress	nucleus, plastid	31.0	33.56
Bra020461.1-P	Field mustard	nucleus	28.03	33.5
KRH37334	Soybean	nucleus, plastid	24.2	30.48
KRH12328	Soybean	plastid	24.2	28.86
Os03t0711100-01	Rice	plastid	16.35	18.29
Os02t0731700-02	Rice	nucleus	17.41	18.14
Os06t0264200-00	Rice	plastid	18.05	17.67
Os08t0119700-00	Rice	plastid	12.31	16.38

Protein Annotations

MapMan:35.1	EntrezGene:4328296	ProteinID:BAD13056.1	ProteinID:BAF07802.1	ProteinID:BAS76981.1	InterPro:CCT_domain
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	InterPro:IPR010402	EnsemblPlantsGene:Os02g0148000	EnsemblPlants:Os02t0148000-01	PFAM:PF06203
PFscan:PS51017	PANTHER:PTHR31874	PANTHER:PTHR31874:SF10	UniProt:Q6Z438	UniParc:UPI0000350409	RefSeq:XP_015624720.1
SEG:seg	:	:	:	:	:

Description

CCT domain-containing gene 3, CCT (CO, CO-LIKE and TOC1) domain protein 3, CCT domain protein 3, CCT MOTIF FAMILY (CMF) gene 3CCT domain containing protein. (Os02t0148000-01)

Coordinates

chr2:+:2638443..2642064

Molecular Weight (calculated)

49754.6 Da

IEP (calculated)

9.367

GRAVY (calculated)

-0.555

Length

471 amino acids

Sequence
(BLAST)

001: MSSSCIPTGL RLDLDIVKAA TSPGAHSSPL RPAHSSPSST LSEASNTSSS SATSVSLKRA RAPRKRPNQA YNEAAALLAS IHPSVFPVKK SPKTASRPPT
101: RQLSGLSAVF DPSSDLLPPL PVLADAAFLL RDTPPTPRQN CSSPAPVSSA FREFRDPAPL SPASPHTTDE PGELDFDDDC FLDVDEAAAD GAAGGIDGIM
201: GSLTVETNTA AATTSDDSIL SSSGIHPYLR SLMVVGLAGR FELGLGSRHG ARPNLNRALK RRDDDGAWWM WPAVPVKDIT VAPPPPTPTP TPPRPQGTAS
301: NTTAAMPSPP SAPEKKKSKK KKVVKVEKVM AREKEEEESP PDARCKEEEA ADGTVDAGNG DGAPTMAPKT GLGLKLDADD VLKAWSGKGS MFADGGAPES
401: PKSAAEVRAK LADIDLFPEN GNGAGGIREA SVMRYKEKRR TRLFSKKIRY QVRKVNADCR PRMKASTRTD S

Best Arabidopsis Sequence Match ( AT4G25990.3 )
(BLAST)

001: MSSCAYSFEL EMMKSPPSNN TPSPSSTISE TNSPPFSIST RRPRTPRKRP NQTYDEAAAL LSTAYPKIFS SKKAKTQIFG TNKSPLSDYD EASQLLLPYV
101: SIEENEFLFN PTIPTKTEHF LEQKEVSFDD LEVNGFGVLD DFDAESILDE EIEEGIDSFM GNIESNDGDR ENCYRVGRLE EIMKNAWNGR FRLGLGLRSS
201: LRQNNDENWW KFPTVEFDQI SPRIQTTAAA AADDGQSNVV DSSKIKTIVT AEGDKKKKKK KKKKKVAPAA AESKSSEVTD SNPKLEQRVS PLLKLDYDGV
301: LEAWSGKESP FSDEILGSDA DGVDFHVRLG EIDLFGESGM REASVLRYKE KRRNRLFSKK IRYQVRKLNA DQRPRMKV

Arabidopsis Description

CILCCT motif family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVJ8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.