Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g008540.2.1 | Tomato | nucleus, plastid | 93.52 | 93.52 |
| VIT_11s0103g00760.t01 | Wine grape | plastid | 57.64 | 59.71 |
| KRH19100 | Soybean | nucleus | 50.69 | 54.89 |
| KRH02778 | Soybean | nucleus, plastid | 50.0 | 54.27 |
| CDY52734 | Canola | nucleus, plastid | 43.75 | 47.49 |
| CDY38274 | Canola | nucleus, plastid | 43.29 | 47.1 |
| CDY42238 | Canola | nucleus | 41.9 | 46.89 |
| CDY47926 | Canola | nucleus | 42.36 | 46.68 |
| Bra020461.1-P | Field mustard | nucleus | 42.36 | 46.45 |
| Bra013939.1-P | Field mustard | plastid | 40.97 | 46.34 |
| Bra019134.1-P | Field mustard | plastid | 40.97 | 46.21 |
| CDX89377 | Canola | plastid | 40.74 | 46.07 |
| Bra002752.1-P | Field mustard | nucleus, plastid | 41.9 | 46.06 |
| CDX94392 | Canola | plastid | 40.28 | 45.31 |
| CDX92740 | Canola | plastid | 41.44 | 45.09 |
| AT4G25990.2 | Thale cress | nucleus | 42.59 | 44.99 |
| AT5G57180.2 | Thale cress | nucleus, plastid | 44.68 | 44.37 |
| GSMUA_Achr6P01780_001 | Banana | nucleus | 41.44 | 43.66 |
| GSMUA_Achr10P... | Banana | nucleus | 31.25 | 41.93 |
| CDY42769 | Canola | nucleus | 22.45 | 41.63 |
| GSMUA_Achr7P19660_001 | Banana | mitochondrion | 42.13 | 41.08 |
| EES04516 | Sorghum | plastid | 41.44 | 36.83 |
| Os02t0148000-01 | Rice | plastid | 38.19 | 35.03 |
| KRH37334 | Soybean | nucleus, plastid | 30.09 | 34.76 |
| HORVU6Hr1G021460.2 | Barley | plastid | 39.12 | 34.49 |
| Zm00001d053880_P001 | Maize | plastid | 37.73 | 34.46 |
| TraesCS6A01G118000.1 | Wheat | plastid | 39.12 | 34.35 |
| TraesCS6B01G146200.2 | Wheat | plastid | 39.12 | 34.21 |
| TraesCS6D01G108000.1 | Wheat | plastid | 39.12 | 34.21 |
| Zm00001d015268_P001 | Maize | plastid | 37.27 | 34.11 |
| KRH12328 | Soybean | plastid | 29.17 | 31.9 |
| Os06t0699600-01 | Rice | plastid | 33.56 | 31.12 |
| TraesCS7D01G414400.2 | Wheat | plastid | 31.48 | 29.76 |
| TraesCS7A01G422200.1 | Wheat | nucleus, plastid | 31.48 | 29.69 |
| TraesCS7B01G322600.1 | Wheat | plastid | 31.25 | 29.54 |
| Zm00001d014664_P001 | Maize | plastid | 29.63 | 29.43 |
| HORVU7Hr1G097630.2 | Barley | cytosol, nucleus | 19.91 | 29.15 |
| KXG20763 | Sorghum | plastid | 30.09 | 28.63 |
| PGSC0003DMT400032849 | Potato | nucleus | 16.2 | 21.67 |
| PGSC0003DMT400014362 | Potato | nucleus | 18.98 | 20.45 |
| PGSC0003DMT400037755 | Potato | nucleus | 19.44 | 18.79 |
| PGSC0003DMT400020030 | Potato | nucleus | 15.28 | 11.72 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400059170 | EnsemblPlantsGene:PGSC0003DMG400022983 | EntrezGene:102605364 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:CCT_domain | InterPro:IPR010402 |
| PANTHER:PTHR31874 | PANTHER:PTHR31874:SF10 | PFAM:PF06203 | PFscan:PS51017 | PGSC:PGSC0003DMG400022983 | RefSeq:XP_006362450.1 |
| SEG:seg | UniParc:UPI000296AAC5 | UniProt:M1C3W4 | MapMan:15.5.1.2 | : | : |
Description
Protein CHLOROPLAST IMPORT APPARATUS 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400022983]
Coordinates
chr7:-:5787577..5791821
Molecular Weight (calculated)
48415.7 Da
IEP (calculated)
8.431
GRAVY (calculated)
-0.751
Length
432 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSCLAGGGR AAYKLDLEII KSPSTSWTSQ SSSPSSTLSE SSNSPIAIST RKPRTPRKRP NQTYNEAAAL LSTVYPKIFS SKHLTKPCKF TKPHYPFSYE
101: SSDLVVPYQI IENSGFLLHP PLIEKPNCVI EHKSVSSCEK PCQSPGEIDS KGSSSLDVCE EFQEDFDAES ILDEEIEEGV IDNIMGKLRV ENEVKNESIF
201: SYSYSHSKRH QNNSGGTCYG FPIGLGFENG YQHYDFGIMR GGVRPLRNVD DGDNWWRYTS SVNVTDITPK FSKPPIEKKK KKVERLVELR GAAETSSAKD
301: NSITKKTNKE NSSQLIKEEV VDVPKPNSGL LLKLNFDDVL NAWSDKESPF SDDIQGSDAT GNDVQARLAQ IDLFSDNGGI REASVLRYKE KRRTRLFSKK
401: IRYQVRKVNA DRRPRMKGRF VKSPNSPEDE LG
101: SSDLVVPYQI IENSGFLLHP PLIEKPNCVI EHKSVSSCEK PCQSPGEIDS KGSSSLDVCE EFQEDFDAES ILDEEIEEGV IDNIMGKLRV ENEVKNESIF
201: SYSYSHSKRH QNNSGGTCYG FPIGLGFENG YQHYDFGIMR GGVRPLRNVD DGDNWWRYTS SVNVTDITPK FSKPPIEKKK KKVERLVELR GAAETSSAKD
301: NSITKKTNKE NSSQLIKEEV VDVPKPNSGL LLKLNFDDVL NAWSDKESPF SDDIQGSDAT GNDVQARLAQ IDLFSDNGGI REASVLRYKE KRRTRLFSKK
401: IRYQVRKVNA DRRPRMKGRF VKSPNSPEDE LG
001: MSACLSSGGG GAAAYSFELE KVKSPPPSSS TTTTRATSPS STISESSNSP LAISTRKPRT QRKRPNQTYN EAATLLSTAY PNIFSSNLSS KQKTHSSSNS
101: HFYGPLLSDN DDASDLLLPY ESIEEPDFLF HPTIQTKTEF FSDQKEVNSG GDCYGGEIEK FDFSDEFDAE SILDEDIEEG IDSIMGTVVE SNSNSGIYES
201: RVPGMINRGG RSSSNRIGKL EQMMMINSWN RSSNGFNFPL GLGLRSALRE NDDTKLWKIH TVDFEQISPR IQTVKTETAI STVDEEKSDG KKVVISGEKS
301: NKKKKKKKMT VTTTLITESK SLEDTEETSL KRTGPLLKLD YDGVLEAWSD KTSPFPDEIQ GSEAVDVNAR LAQIDLFGDS GMREASVLRY KEKRRTRLFS
401: KKIRYQVRKL NADQRPRMKG RFVRRPNEST PSGQR
101: HFYGPLLSDN DDASDLLLPY ESIEEPDFLF HPTIQTKTEF FSDQKEVNSG GDCYGGEIEK FDFSDEFDAE SILDEDIEEG IDSIMGTVVE SNSNSGIYES
201: RVPGMINRGG RSSSNRIGKL EQMMMINSWN RSSNGFNFPL GLGLRSALRE NDDTKLWKIH TVDFEQISPR IQTVKTETAI STVDEEKSDG KKVVISGEKS
301: NKKKKKKKMT VTTTLITESK SLEDTEETSL KRTGPLLKLD YDGVLEAWSD KTSPFPDEIQ GSEAVDVNAR LAQIDLFGDS GMREASVLRY KEKRRTRLFS
401: KKIRYQVRKL NADQRPRMKG RFVRRPNEST PSGQR
Arabidopsis Description
CIA2CIA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UDY1]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.