CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014664_P001	Maize	plastid	85.9	89.66
TraesCS7D01G414400.2	Wheat	plastid	63.66	63.24
TraesCS7B01G322600.1	Wheat	plastid	63.22	62.8
TraesCS7A01G422200.1	Wheat	nucleus, plastid	62.56	62.01
Os06t0699600-01	Rice	plastid	61.23	59.66
HORVU7Hr1G097630.2	Barley	cytosol, nucleus	36.78	56.61
EES04516	Sorghum	plastid	53.08	49.59
GSMUA_Achr10P...	Banana	nucleus	25.99	36.65
GSMUA_Achr7P19660_001	Banana	mitochondrion	34.58	35.44
GSMUA_Achr6P01780_001	Banana	nucleus	31.94	35.37
KRH02778	Soybean	nucleus, plastid	27.31	31.16
KRH19100	Soybean	nucleus	27.31	31.08
VIT_11s0103g00760.t01	Wine grape	plastid	27.75	30.22
PGSC0003DMT400059170	Potato	plastid	28.63	30.09
Solyc07g008540.2.1	Tomato	nucleus, plastid	28.19	29.63
CDY38274	Canola	nucleus, plastid	25.77	29.47
CDX94392	Canola	plastid	24.89	29.43
CDY42238	Canola	nucleus	24.89	29.27
Bra020461.1-P	Field mustard	nucleus	25.33	29.19
CDX89377	Canola	plastid	24.45	29.06
CDY52734	Canola	nucleus, plastid	25.33	28.89
AT4G25990.2	Thale cress	nucleus	25.99	28.85
CDY47926	Canola	nucleus	24.89	28.83
Bra013939.1-P	Field mustard	plastid	24.23	28.8
Bra002752.1-P	Field mustard	nucleus, plastid	24.67	28.5
Bra019134.1-P	Field mustard	plastid	24.01	28.46
AT5G57180.2	Thale cress	nucleus, plastid	26.43	27.59
CDX92740	Canola	plastid	23.79	27.2
KRH37334	Soybean	nucleus, plastid	19.38	23.53
KRH12328	Soybean	plastid	20.26	23.29
CDY42769	Canola	nucleus	11.01	21.46
EER93585	Sorghum	plastid	14.1	15.24
EER88191	Sorghum	nucleus, plastid	14.54	13.92
KXG24303	Sorghum	mitochondrion, nucleus	9.03	13.9
EES05581	Sorghum	nucleus, plastid	13.44	12.5

Protein Annotations

EnsemblPlants:KXG20763	EnsemblPlantsGene:SORBI_3010G250100	PANTHER:PTHR31874	PANTHER:PTHR31874:SF7	ProteinID:KXG20763	ProteinID:KXG20763.1
SEG:seg	UniParc:UPI0007F284D9	UniProt:A0A194YLD3	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr10:+:58934310..58937530

Molecular Weight (calculated)

47806.8 Da

IEP (calculated)

7.796

GRAVY (calculated)

-0.352

Length

454 amino acids

Sequence
(BLAST)

001: MASSCIPAGG IRLPDLEMVK AAPPPAPPRP AHSAAASSTL SEASSNASAA SSSATSSSVA ASLSLKRPRT PRKRPSQTYN EAAALLASMY PSVFPVAKGF
101: GGLEAPPPPR LLGLASALAD DPSCSDLLPP FPVPGGQAAF LLRDLPPPPP PRPLTPRSPA ARGCPSPSAV SSVFSEFRDP APSPATPDDA AAAPDEPGEL
201: DFDDDDGFDA DSILCGVDEG AAEGIDGIMG KLSMENNVTS VSSGDSNLPR SKMMHPCLRN LMVLGLSFRH DQSIINQALK RHSVDPEWWM CPAIPVKDIT
301: PVPPSVAMAK VTDKKKTKKK SLGTIYEEGT PEFANGDTGA LALPETGLGL SLNTDGVLKA WRGRGSVFAN GNGPDLPLSS AHVVVKHEDS DLFPKNGTSA
401: VIREGNILKM QHKQKPCTPL PSNKQSRYYR PRVKGRFVSK AYFLQQQQAL EKES

Best Arabidopsis Sequence Match ( AT5G57180.3 )
(BLAST)

001: MSACLSSGGG GAAAYSFELE KVKSPPPSSS TTTTRATSPS STISESSNSP LAISTRKPRT QRKRPNQTYN EAATLLSTAY PNIFSSNLSS KQKTHSSSNS
101: HFYGPLLSDN DDASDLLLPY ESIEEPDFLF HPTIQTKTEF FSDQKEVNSG GDCYGGEIEK FDFSDEFDAE SILDEDIEEG IDSIMGTVVE SNSNSGIYES
201: RVPGMINRGG RSSSNRIGKL EQMMMINSWN RSSNGFNFPL GLGLRSALRE NDDTKLWKIH TVDFEQISPR IQTVKTETAI STVDEEKSDG KKVVISGEKS
301: NKKKKKKKMT VTTTLITESK SLEDTEETSL KRTGPLLKLD YDGVLEAWSD KTSPFPDEIQ GSEAVDVNVC LTLISS

Arabidopsis Description

CIA2CIA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UDY1]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.