Factsheet for Os06t0699600-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
mitochondrion 1
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G414400.2	Wheat	plastid	63.95	65.21
TraesCS7B01G322600.1	Wheat	plastid	63.52	64.77
TraesCS7A01G422200.1	Wheat	nucleus, plastid	63.52	64.63
Zm00001d014664_P001	Maize	plastid	57.3	61.38
KXG20763	Sorghum	plastid	59.66	61.23
HORVU7Hr1G097630.2	Barley	cytosol, nucleus	38.41	60.68
Os02t0148000-01	Rice	plastid	52.79	52.23
GSMUA_Achr6P01780_001	Banana	nucleus	35.41	40.24
GSMUA_Achr7P19660_001	Banana	mitochondrion	37.77	39.73
GSMUA_Achr10P...	Banana	nucleus	27.04	39.13
KRH02778	Soybean	nucleus, plastid	31.76	37.19
KRH19100	Soybean	nucleus	31.12	36.34
VIT_11s0103g00760.t01	Wine grape	plastid	31.33	35.01
Solyc07g008540.2.1	Tomato	nucleus, plastid	31.12	33.56
PGSC0003DMT400059170	Potato	plastid	31.12	33.56
CDY38274	Canola	nucleus, plastid	28.11	33.0
CDY42238	Canola	nucleus	27.04	32.64
Bra020461.1-P	Field mustard	nucleus	27.47	32.49
CDY52734	Canola	nucleus, plastid	27.68	32.41
CDY47926	Canola	nucleus	27.04	32.14
Bra002752.1-P	Field mustard	nucleus, plastid	27.04	32.06
Bra019134.1-P	Field mustard	plastid	25.97	31.59
CDX92740	Canola	plastid	26.82	31.49
Bra013939.1-P	Field mustard	plastid	25.75	31.41
CDX89377	Canola	plastid	25.75	31.41
CDX94392	Canola	plastid	25.75	31.25
AT4G25990.2	Thale cress	nucleus	27.04	30.81
AT5G57180.2	Thale cress	nucleus, plastid	28.11	30.11
CDY42769	Canola	nucleus	13.73	27.47
KRH37334	Soybean	nucleus, plastid	21.89	27.27
KRH12328	Soybean	plastid	22.32	26.33
Os03t0711100-01	Rice	plastid	15.24	16.86
Os02t0731700-02	Rice	nucleus	16.09	16.59
Os06t0264200-00	Rice	plastid	15.02	14.55
Os08t0119700-00	Rice	plastid	10.3	13.56

Protein Annotations

MapMan:35.2	EntrezGene:4341958	EMBL:AK121295	ProteinID:BAD53999.1	ProteinID:BAF20387.1	ProteinID:BAS99328.1
InterPro:CCT_domain	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	InterPro:IPR010402	EnsemblPlantsGene:Os06g0699600	EnsemblPlants:Os06t0699600-01	PFAM:PF06203
PFscan:PS51017	PANTHER:PTHR31874	PANTHER:PTHR31874:SF7	UniProt:Q5Z857	UniParc:UPI0000446EF4	RefSeq:XP_015644406.1
SEG:seg	:	:	:	:	:

Description

CCT domain-containing gene 25, CCT (CO, CO-LIKE and TOC1) domain protein 25, CCT domain protein 25, CCT MOTIF FAMILY (CMF) gene 7CCT domain containing protein. (Os06t0699600-01)

Coordinates

chr6:+:29407744..29411786

Molecular Weight (calculated)

49317.4 Da

IEP (calculated)

7.118

GRAVY (calculated)

-0.345

Length

466 amino acids

Sequence
(BLAST)

001: MASSCIPTGL RLDLEMVKAA APPGGSSAAA HSSASSTLSE ASNSSSSSVA SLSLKRARTP RKRPNQTYNE AAALLASMYP SVFPVIKGAG TAPPRLLGLA
101: TALADDPSSS DLLPPFPVLG NGSAAHLLRD TPPPPTPRCP APIKSCSSPA PVSSVFREFR DAAPSPGTPD ADADVTDDDY LGELDFEDED GFDADSFLAV
201: DDGVAEGIDR IMGKLSMEKN SAAASRADAV LSSAAIHPYI RSLMVLGLGF RQGRLNAGQA LKRHDDESDW WMCPAIPVKE IAAPPAPSVA MPVPVPMPLQ
301: ASDKKKKKSK KKSLKEIERD NAIAVGECKF GDEGTLGFDH GDAGISALKD PKIGLGLNLN TEEVLKAWCN SGSVFAGCDA LESPRSSSDL HAKLADIDLF
401: LDNNTSGVIR EGSMLKLRHK QKQCTPLLSN KTRYQSRKVN AECRPRVKGK YVSQASLLQQ ASEKER

Best Arabidopsis Sequence Match ( AT5G57180.2 )
(BLAST)

001: MSACLSSGGG GAAAYSFELE KVKSPPPSSS TTTTRATSPS STISESSNSP LAISTRKPRT QRKRPNQTYN EAATLLSTAY PNIFSSNLSS KQKTHSSSNS
101: HFYGPLLSDN DDASDLLLPY ESIEEPDFLF HPTIQTKTEF FSDQKEVNSG GDCYGGEIEK FDFSDEFDAE SILDEDIEEG IDSIMGTVVE SNSNSGIYES
201: RVPGMINRGG RSSSNRIGKL EQMMMINSWN RSSNGFNFPL GLGLRSALRE NDDTKLWKIH TVDFEQISPR IQTVKTETAI STVDEEKSDG KKVVISGEKS
301: NKKKKKKKMT VTTTLITESK SLEDTEETSL KRTGPLLKLD YDGVLEAWSD KTSPFPDEIQ GSEAVDVNAR LAQIDLFGDS GMREASVLRY KEKRRTRLFS
401: KKIRYQVRKL NADQRPRMKG RFVRRPNEST PSGQR

Arabidopsis Description

CIA2CIA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UDY1]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.