Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89377 | Canola | plastid | 65.77 | 70.42 |
| Bra013939.1-P | Field mustard | plastid | 65.77 | 70.42 |
| CDX94392 | Canola | plastid | 65.77 | 70.05 |
| Bra019134.1-P | Field mustard | plastid | 63.08 | 67.36 |
| CDX92740 | Canola | plastid | 64.79 | 66.75 |
| CDY42769 | Canola | nucleus | 36.67 | 64.38 |
| AT5G57180.2 | Thale cress | nucleus, plastid | 57.7 | 54.25 |
| VIT_11s0103g00760.t01 | Wine grape | plastid | 45.48 | 44.6 |
| KRH02778 | Soybean | nucleus, plastid | 42.3 | 43.47 |
| KRH19100 | Soybean | nucleus | 41.81 | 42.86 |
| PGSC0003DMT400059170 | Potato | plastid | 44.99 | 42.59 |
| Solyc07g008540.2.1 | Tomato | nucleus, plastid | 44.74 | 42.36 |
| GSMUA_Achr6P01780_001 | Banana | nucleus | 36.92 | 36.83 |
| KRH37334 | Soybean | nucleus, plastid | 31.78 | 34.76 |
| GSMUA_Achr7P19660_001 | Banana | mitochondrion | 36.67 | 33.86 |
| GSMUA_Achr10P... | Banana | nucleus | 25.67 | 32.61 |
| KRH12328 | Soybean | plastid | 30.81 | 31.9 |
| EES04516 | Sorghum | plastid | 36.92 | 31.07 |
| HORVU6Hr1G021460.2 | Barley | plastid | 37.16 | 31.02 |
| TraesCS6A01G118000.1 | Wheat | plastid | 36.92 | 30.69 |
| TraesCS6B01G146200.2 | Wheat | plastid | 36.92 | 30.57 |
| TraesCS6D01G108000.1 | Wheat | plastid | 36.92 | 30.57 |
| Os02t0148000-01 | Rice | plastid | 34.72 | 30.15 |
| Zm00001d053880_P001 | Maize | plastid | 33.99 | 29.39 |
| Zm00001d015268_P001 | Maize | plastid | 33.5 | 29.03 |
| Os06t0699600-01 | Rice | plastid | 30.81 | 27.04 |
| Zm00001d014664_P001 | Maize | plastid | 28.12 | 26.44 |
| TraesCS7D01G414400.2 | Wheat | plastid | 29.34 | 26.26 |
| TraesCS7A01G422200.1 | Wheat | nucleus, plastid | 29.34 | 26.2 |
| HORVU7Hr1G097630.2 | Barley | cytosol, nucleus | 18.83 | 26.1 |
| TraesCS7B01G322600.1 | Wheat | plastid | 29.1 | 26.04 |
| KXG20763 | Sorghum | plastid | 28.85 | 25.99 |
| AT1G07050.2 | Thale cress | nucleus | 12.22 | 25.25 |
| AT5G14370.1 | Thale cress | nucleus | 16.14 | 19.47 |
| AT1G68520.1 | Thale cress | nucleus | 18.58 | 18.72 |
| AT1G73870.1 | Thale cress | nucleus | 17.85 | 18.62 |
| AT1G25440.1 | Thale cress | nucleus | 18.83 | 18.47 |
| AT1G49130.1 | Thale cress | nucleus | 13.45 | 16.87 |
Protein Annotations
| MapMan:35.1 | EntrezGene:828705 | EMBL:AB493701 | ProteinID:AEE85141.1 | ArrayExpress:AT4G25990 | EnsemblPlantsGene:AT4G25990 |
| RefSeq:AT4G25990 | TAIR:AT4G25990 | RefSeq:AT4G25990-TAIR-G | EnsemblPlants:AT4G25990.2 | TAIR:AT4G25990.2 | Unigene:At.2953 |
| UniProt:C0SVJ8 | InterPro:CCT_domain | Symbol:CIL | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR010402 | RefSeq:NP_849445.1 |
| PFAM:PF06203 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0007064 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007611 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009025 | PO:PO:0009031 |
| PO:PO:0020038 | PO:PO:0025022 | PFscan:PS51017 | PANTHER:PTHR31874 | PANTHER:PTHR31874:SF10 | UniParc:UPI0000196DD6 |
| SEG:seg | : | : | : | : | : |
Description
CILCCT motif family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVJ8]
Coordinates
chr4:-:13191690..13193620
Molecular Weight (calculated)
46354.5 Da
IEP (calculated)
8.407
GRAVY (calculated)
-0.774
Length
409 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSCAYSFEL EMMKSPPSNN TPSPSSTISE TNSPPFSIST RRPRTPRKRP NQTYDEAAAL LSTAYPKIFS SKKAKTQIFG TNKSPLSDYD EASQLLLPYV
101: SIEENEFLFN PTIPTKTEHF LEQKEVSFDD LEVNGFGVLD DFDAESILDE EIEEGIDSFM GNIESNDGDR ENCYRVGRLE EIMKNAWNGR FRLGLGLRSS
201: LRQNNDENWW KFPTVEFDQI SPRIQTTAAA AADDGQSNVV DSSKIKTIVT AEGDKKKKKK KKKKKVAPAA AESKSSEVTD SNPKLEQRVS PLLKLDYDGV
301: LEAWSGKESP FSDEILGSDA DGVDFHVRLG EIDLFGESGM REASVLRYKE KRRNRLFSKK IRYQVRKLNA DQRPRMKVKD WHCNIVVVSH QQGRFVRRPN
401: ARNLSGLRL
101: SIEENEFLFN PTIPTKTEHF LEQKEVSFDD LEVNGFGVLD DFDAESILDE EIEEGIDSFM GNIESNDGDR ENCYRVGRLE EIMKNAWNGR FRLGLGLRSS
201: LRQNNDENWW KFPTVEFDQI SPRIQTTAAA AADDGQSNVV DSSKIKTIVT AEGDKKKKKK KKKKKVAPAA AESKSSEVTD SNPKLEQRVS PLLKLDYDGV
301: LEAWSGKESP FSDEILGSDA DGVDFHVRLG EIDLFGESGM REASVLRYKE KRRNRLFSKK IRYQVRKLNA DQRPRMKVKD WHCNIVVVSH QQGRFVRRPN
401: ARNLSGLRL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.