Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G108000.1 | Wheat | plastid | 98.18 | 98.18 |
| TraesCS6A01G118000.1 | Wheat | plastid | 96.96 | 97.36 |
| HORVU6Hr1G021460.2 | Barley | plastid | 96.56 | 97.35 |
| EES04516 | Sorghum | plastid | 82.59 | 83.95 |
| Os02t0148000-01 | Rice | plastid | 76.92 | 80.68 |
| Zm00001d015268_P001 | Maize | plastid | 76.72 | 80.3 |
| TraesCS7B01G322600.1 | Wheat | plastid | 52.43 | 56.67 |
| GSMUA_Achr6P01780_001 | Banana | nucleus | 42.31 | 50.98 |
| GSMUA_Achr7P19660_001 | Banana | mitochondrion | 44.13 | 49.21 |
| GSMUA_Achr10P... | Banana | nucleus | 29.55 | 45.34 |
| KRH19100 | Soybean | nucleus | 33.81 | 41.85 |
| KRH02778 | Soybean | nucleus, plastid | 33.4 | 41.46 |
| Solyc07g008540.2.1 | Tomato | nucleus, plastid | 34.62 | 39.58 |
| VIT_11s0103g00760.t01 | Wine grape | plastid | 33.2 | 39.33 |
| PGSC0003DMT400059170 | Potato | plastid | 34.21 | 39.12 |
| CDX89377 | Canola | plastid | 29.55 | 38.22 |
| Bra019134.1-P | Field mustard | plastid | 29.55 | 38.12 |
| Bra013939.1-P | Field mustard | plastid | 29.35 | 37.96 |
| CDX94392 | Canola | plastid | 29.15 | 37.5 |
| CDY42769 | Canola | nucleus | 17.61 | 37.34 |
| CDY38274 | Canola | nucleus, plastid | 29.76 | 37.03 |
| CDY52734 | Canola | nucleus, plastid | 29.76 | 36.93 |
| AT4G25990.2 | Thale cress | nucleus | 30.57 | 36.92 |
| Bra020461.1-P | Field mustard | nucleus | 28.74 | 36.04 |
| CDX92740 | Canola | plastid | 28.95 | 36.02 |
| Bra002752.1-P | Field mustard | nucleus, plastid | 28.54 | 35.88 |
| CDY47926 | Canola | nucleus | 28.34 | 35.71 |
| CDY42238 | Canola | nucleus | 27.73 | 35.49 |
| AT5G57180.2 | Thale cress | nucleus, plastid | 30.77 | 34.94 |
| KRH37334 | Soybean | nucleus, plastid | 23.68 | 31.28 |
| KRH12328 | Soybean | plastid | 23.68 | 29.62 |
| TraesCS7B01G215100.1 | Wheat | nucleus | 13.16 | 22.03 |
| TraesCS4B01G045700.1 | Wheat | nucleus, plastid | 17.41 | 20.92 |
| TraesCS7B01G113400.1 | Wheat | nucleus | 17.41 | 19.91 |
| TraesCS6B01G323400.1 | Wheat | nucleus | 16.8 | 19.39 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G146200.2 | EnsemblPlantsGene:TraesCS6B01G146200 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:CCT_domain |
| InterPro:IPR010402 | PANTHER:PTHR31874 | PANTHER:PTHR31874:SF7 | PFAM:PF06203 | PFscan:PS51017 | SEG:seg |
| MapMan:15.5.1.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6B:+:146696877..146699849
Molecular Weight (calculated)
52029.1 Da
IEP (calculated)
7.540
GRAVY (calculated)
-0.541
Length
494 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSSCIPTGL RLDLDMVKAA ASPGAHAHSS PLRPAHSSPS STLSEASNAS SSATSVSLKR ARAPRKRPNQ AYNEAAALLA SIHPSVFPVK KSPKTATAPR
101: PPLSGLAVAF GAASPSSSDL LPPLPVLSDA AFLLRDHAAS PSPPPPPHSP STDACKNCSS PTPVSSAFRE FRDPAPSPAS PDTATDEPGE LDFDDDGFDA
201: ESILDVDEAA AGGAAEGIDG IMGSLTMEAN TATATSDDSI LSSSGIHPYL RSLMVVGLAG RFELGLGSRQ STRPNLNRAL KRRDDDGAWW MWPAVPVKDI
301: TVTPPTPPPK EPAAPVSNTA MPPPASAAPE KKKSKKKKKV KMEKLMAKEE ELANGKCEEG ADGTVDAADG NGDDDSAPTK APKTGLGLKL DTDDVLKEWS
401: GKGSMFAEGG APDSSESAAE VRAKLADIDL FPENGSGGIR EARVMRYKEK RRNRLFSKKI RYQVRKVNAD CRPRMKGRFV RSPSLLQQAL EEES
101: PPLSGLAVAF GAASPSSSDL LPPLPVLSDA AFLLRDHAAS PSPPPPPHSP STDACKNCSS PTPVSSAFRE FRDPAPSPAS PDTATDEPGE LDFDDDGFDA
201: ESILDVDEAA AGGAAEGIDG IMGSLTMEAN TATATSDDSI LSSSGIHPYL RSLMVVGLAG RFELGLGSRQ STRPNLNRAL KRRDDDGAWW MWPAVPVKDI
301: TVTPPTPPPK EPAAPVSNTA MPPPASAAPE KKKSKKKKKV KMEKLMAKEE ELANGKCEEG ADGTVDAADG NGDDDSAPTK APKTGLGLKL DTDDVLKEWS
401: GKGSMFAEGG APDSSESAAE VRAKLADIDL FPENGSGGIR EARVMRYKEK RRNRLFSKKI RYQVRKVNAD CRPRMKGRFV RSPSLLQQAL EEES
001: MSACLSSGGG GAAAYSFELE KVKSPPPSSS TTTTRATSPS STISESSNSP LAISTRKPRT QRKRPNQTYN EAATLLSTAY PNIFSSNLSS KQKTHSSSNS
101: HFYGPLLSDN DDASDLLLPY ESIEEPDFLF HPTIQTKTEF FSDQKEVNSG GDCYGGEIEK FDFSDEFDAE SILDEDIEEG IDSIMGTVVE SNSNSGIYES
201: RVPGMINRGG RSSSNRIGKL EQMMMINSWN RSSNGFNFPL GLGLRSALRE NDDTKLWKIH TVDFEQISPR IQTVKTETAI STVDEEKSDG KKVVISGEKS
301: NKKKKKKKMT VTTTLITESK SLEDTEETSL KRTGPLLKLD YDGVLEAWSD KTSPFPDEIQ GSEAVDVNAR LAQIDLFGDS GMREASVLRY KEKRRTRLFS
401: KKIRYQVRKL NADQRPRMKG RFVRRPNEST PSGQR
101: HFYGPLLSDN DDASDLLLPY ESIEEPDFLF HPTIQTKTEF FSDQKEVNSG GDCYGGEIEK FDFSDEFDAE SILDEDIEEG IDSIMGTVVE SNSNSGIYES
201: RVPGMINRGG RSSSNRIGKL EQMMMINSWN RSSNGFNFPL GLGLRSALRE NDDTKLWKIH TVDFEQISPR IQTVKTETAI STVDEEKSDG KKVVISGEKS
301: NKKKKKKKMT VTTTLITESK SLEDTEETSL KRTGPLLKLD YDGVLEAWSD KTSPFPDEIQ GSEAVDVNAR LAQIDLFGDS GMREASVLRY KEKRRTRLFS
401: KKIRYQVRKL NADQRPRMKG RFVRRPNEST PSGQR
Arabidopsis Description
CIA2CIA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UDY1]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.