Factsheet for TraesCS7B01G215100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G311500.1	Wheat	nucleus	94.24	95.86
TraesCS7A01G314300.1	Wheat	nucleus	94.92	93.96
HORVU7Hr1G074960.1	Barley	nucleus	58.64	76.55
HORVU2Hr1G056960.1	Barley	peroxisome	26.1	73.33
HORVU7Hr1G074920.1	Barley	extracellular, mitochondrion	65.42	64.77
KXG24303	Sorghum	mitochondrion, nucleus	54.58	54.58
Zm00001d049651_P001	Maize	mitochondrion, nucleus, peroxisome, plastid	48.47	52.77
Os08t0119700-00	Rice	plastid	63.05	52.54
Zm00001d035134_P001	Maize	plastid	47.12	52.06
CDX70561	Canola	nucleus	17.97	35.1
GSMUA_Achr11P...	Banana	nucleus	22.03	34.39
Bra023461.1-P	Field mustard	cytosol	17.63	33.99
GSMUA_Achr10P...	Banana	nucleus	31.53	32.29
VIT_14s0219g00220.t01	Wine grape	nucleus, plastid	30.17	28.71
Solyc02g093590.2.1	Tomato	nucleus	29.15	26.88
PGSC0003DMT400032849	Potato	nucleus	28.47	26.01
CDX85600	Canola	nucleus	26.44	24.53
CDX91067	Canola	nucleus	26.1	23.84
AT5G14370.1	Thale cress	nucleus	26.78	23.3
CDX69586	Canola	nucleus, plastid	25.76	23.03
CDY09849	Canola	nucleus	25.76	22.96
KRH07084	Soybean	plastid	27.12	22.6
KRG94369	Soybean	plastid	26.78	22.32
CDX78575	Canola	nucleus	22.37	21.93
Bra006252.1-P	Field mustard	nucleus	22.37	21.93
TraesCS4B01G045700.1	Wheat	nucleus, plastid	20.34	14.6
TraesCS6B01G323400.1	Wheat	nucleus	20.68	14.25
Bra008763.1-P	Field mustard	nucleus, plastid	25.76	14.21
TraesCS7B01G113400.1	Wheat	nucleus	20.68	14.12
TraesCS6B01G146200.2	Wheat	plastid	22.03	13.16
Bra023462.1-P	Field mustard	nucleus	6.78	12.58
TraesCS7B01G322600.1	Wheat	plastid	16.61	10.72

Protein Annotations

EnsemblPlants:TraesCS7B01G215100.1	EnsemblPlantsGene:TraesCS7B01G215100	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:CCT_domain
InterPro:IPR010402	PANTHER:PTHR31874	PANTHER:PTHR31874:SF6	PFAM:PF06203	PFscan:PS51017	SEG:seg
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr7B:+:394763588..394766972

Molecular Weight (calculated)

31437.9 Da

IEP (calculated)

10.278

GRAVY (calculated)

-0.568

Length

295 amino acids

Sequence
(BLAST)

001: MASGGGGDRR RGSCRAKGKK KKKTKYLSLS RHLAKAVEVH RPAESLSVED SLPPPSALPS PSTEEAVEDG CGHEQQQLEP FTLHPEAPST LFAAAPSLTD
101: ILGVSSSSFS GGGERGSPSC TLSPDASAGT AGGKEEDLAR RALRGRERWV YCRSSSSSPS AATATTTTSS SCSSAASTGA ASARSPLLKL DYDEILAAWA
201: GRGSLFIGGT ASHVTPKLEL DSEVFVDVAP PPQAATWSSP EVSGRAERVR RYKEKRHARL FSKRIRYEVR RLNAVRRPRL KGRFIKEKEG VAMAD

Best Arabidopsis Sequence Match ( AT5G14370.1 )
(BLAST)

001: MCSNKASPVV GEEKQSTRSS KRIKKRKNRE ATTTMEDKSS SNLDASRKIR TKTKKPKFLS LKLELNTSHE INENPRSKKS KKKNNNKKQS KKKEPDTTPF
101: KEKKRAETTT TLGGGEKEEE QYDTVAAYLF NSATDSTISS IHDLLPSSAA TDVDCGGERN NLSPYDRQDH GSSSSSLLRT AMRKGASEEE ETTEERWVSY
201: SEVVEEVMSR SGTPRCCGGG DGNDGRPSLA LKLDYEQIME AWSDKGTLYV DGEPPQTVPD LHASADGFND GGEAGNLWAV PEMETTERLW RGHREASLLR
301: YKEKRQNRLF SKRIRYQVRK LNAEKRPRVK GRFVKREDS

Arabidopsis Description

CCT motif family protein [Source:UniProtKB/TrEMBL;Acc:Q949T9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.