Factsheet for Os08t0119700-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
nucleus 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G311500.1	Wheat	nucleus	53.11	64.83
TraesCS7A01G314300.1	Wheat	nucleus	53.11	63.09
TraesCS7B01G215100.1	Wheat	nucleus	52.54	63.05
KXG24303	Sorghum	mitochondrion, nucleus	47.74	57.29
HORVU7Hr1G074960.1	Barley	nucleus	35.59	55.75
Zm00001d035134_P001	Maize	plastid	39.83	52.81
Zm00001d049651_P001	Maize	mitochondrion, nucleus, peroxisome, plastid	39.83	52.03
HORVU2Hr1G056960.1	Barley	peroxisome	15.25	51.43
HORVU7Hr1G074920.1	Barley	extracellular, mitochondrion	38.14	45.3
CDX70561	Canola	nucleus	15.54	36.42
Bra023461.1-P	Field mustard	cytosol	14.97	34.64
GSMUA_Achr11P...	Banana	nucleus	18.36	34.39
GSMUA_Achr10P...	Banana	nucleus	25.71	31.6
VIT_14s0219g00220.t01	Wine grape	nucleus, plastid	25.71	29.35
Solyc02g093590.2.1	Tomato	nucleus	24.01	26.56
CDX85600	Canola	nucleus	22.88	25.47
CDX69586	Canola	nucleus, plastid	23.73	25.45
PGSC0003DMT400032849	Potato	nucleus	23.16	25.39
CDY09849	Canola	nucleus	23.16	24.77
CDX91067	Canola	nucleus	22.6	24.77
KRG94369	Soybean	plastid	24.29	24.29
KRH07084	Soybean	plastid	24.29	24.29
AT5G14370.1	Thale cress	nucleus	23.16	24.19
CDX78575	Canola	nucleus	18.93	22.26
Bra006252.1-P	Field mustard	nucleus	18.93	22.26
Os03t0711100-01	Rice	plastid	19.49	16.39
Os02t0731700-02	Rice	nucleus	20.06	15.71
Os06t0264200-00	Rice	plastid	21.19	15.59
Bra008763.1-P	Field mustard	nucleus, plastid	23.45	15.51
Bra023462.1-P	Field mustard	nucleus	6.21	13.84
Os02t0148000-01	Rice	plastid	16.38	12.31
Os06t0699600-01	Rice	plastid	13.56	10.3

Protein Annotations

EnsemblPlants:Os08t0119700-00	EnsemblPlantsGene:Os08g0119700	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:CCT_domain	InterPro:IPR010402	PANTHER:PTHR31874
PANTHER:PTHR31874:SF6	PFAM:PF06203	PFscan:PS51017	ProteinID:BAT03583.1	SEG:seg	UniParc:UPI00039391F0
UniProt:A0A0P0XB35	MapMan:35.2	:	:	:	:

Description

CCT domain domain containing protein. (Os08t0119700-00)

Coordinates

chr8:-:1084457..1086835

Molecular Weight (calculated)

37482.5 Da

IEP (calculated)

10.784

GRAVY (calculated)

-0.468

Length

354 amino acids

Sequence
(BLAST)

001: MARRHVTPTR HVSKGSRKSG EIPLTFPPNS LARCFSSPAL FLQRGPSGCV VFALVGRGAM ASGGARRRKG RRGGRGNVKR RTKYLSLSRF LIKKEEEEEV
101: VVVAVRSPEL VPKDEAPSSP EDGGDGGEDE EEKPQMEPFA LHPEPSTLFA AAPSLTDILG ASAGGGGGGG GESSSAASPG VSGGKELSGE EDDLARRALR
201: GRERWVYCSS SSPSATTTTT TTTSSSCSSA ASTGASSGGA AARSLLLKLD YEEILAAWAG RGSLYIGGAA AHRRRMLVQV FVEVSASPEP AAAAAAWSVA
301: EPAARAEKVR RYKEKRQGRL FAKRIRYEVR RLNAVKRPRL KGRFIKEKEG AAIT

Best Arabidopsis Sequence Match ( AT1G68520.1 )
(BLAST)

001: MMKSLASAVG GKTARACDSC VKRRARWYCA ADDAFLCHAC DGSVHSANPL ARRHERVRLK SASAGKYRHA SPPHQATWHQ GFTRKARTPR GGKKSHTMVF
101: HDLVPEMSTE DQAESYEVEE QLIFEVPVMN SMVEEQCFNQ SLEKQNEFPM MPLSFKSSDE EDDDNAESCL NGLFPTDMEL AQFTADVETL LGGGDREFHS
201: IEELGLGEML KIEKEEVEEE GVVTREVHDQ DEGDETSPFE ISFDYEYTHK TTFDEGEEDE KEDVMKNVME MGVNEMSGGI KEEKKEKALM LRLDYESVIS
301: TWGGQGIPWT ARVPSEIDLD MVCFPTHTMG ESGAEAHHHN HFRGLGLHLG DAGDGGREAR VSRYREKRRT RLFSKKIRYE VRKLNAEKRP RMKGRFVKRS
401: SIGVAH

Arabidopsis Description

COL6Zinc finger protein CONSTANS-LIKE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG76]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.