Factsheet for Zm00001d049651_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid, nucleus

Predictor Summary:

mitochondrion 3
peroxisome 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG24303	Sorghum	mitochondrion, nucleus	75.65	69.49
Zm00001d035134_P001	Maize	plastid	62.36	63.3
TraesCS7D01G311500.1	Wheat	nucleus	53.51	50.0
TraesCS7A01G314300.1	Wheat	nucleus	53.87	48.99
TraesCS7B01G215100.1	Wheat	nucleus	52.77	48.47
HORVU7Hr1G074960.1	Barley	nucleus	36.53	43.81
HORVU2Hr1G056960.1	Barley	peroxisome	16.24	41.9
Os08t0119700-00	Rice	plastid	52.03	39.83
GSMUA_Achr11P...	Banana	nucleus	25.46	36.51
HORVU7Hr1G074920.1	Barley	extracellular, mitochondrion	38.75	35.23
Bra023461.1-P	Field mustard	cytosol	18.82	33.33
CDX70561	Canola	nucleus	18.45	33.11
GSMUA_Achr10P...	Banana	nucleus	32.1	30.21
VIT_14s0219g00220.t01	Wine grape	nucleus, plastid	29.89	26.13
Solyc02g093590.2.1	Tomato	nucleus	27.68	23.44
CDX85600	Canola	nucleus	27.31	23.27
PGSC0003DMT400032849	Potato	nucleus	27.31	22.91
CDX69586	Canola	nucleus, plastid	27.68	22.73
CDY09849	Canola	nucleus	27.31	22.36
CDX91067	Canola	nucleus	26.57	22.29
CDX78575	Canola	nucleus	23.99	21.59
Bra006252.1-P	Field mustard	nucleus	23.99	21.59
KRG94369	Soybean	plastid	28.04	21.47
AT5G14370.1	Thale cress	nucleus	26.57	21.24
KRH07084	Soybean	plastid	26.94	20.62
Bra008763.1-P	Field mustard	nucleus, plastid	27.31	13.83
Zm00001d013443_P001	Maize	plastid	21.03	13.8
Zm00001d017939_P001	Maize	nucleus	22.88	13.33
Zm00001d053880_P001	Maize	plastid	23.25	13.32
Zm00001d037327_P001	Maize	mitochondrion, nucleus	22.14	13.27
Zm00001d045661_P001	Maize	nucleus	22.14	13.16
Zm00001d015268_P001	Maize	plastid	22.14	12.71
Zm00001d033719_P001	Maize	plastid	20.3	11.68
Bra023462.1-P	Field mustard	nucleus	6.27	10.69
Zm00001d014664_P001	Maize	plastid	15.5	9.66

Protein Annotations

EnsemblPlants:Zm00001d049651_P001	EnsemblPlants:Zm00001d049651_T001	EnsemblPlantsGene:Zm00001d049651	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:CCT_domain	InterPro:IPR010402
PANTHER:PTHR31874	PANTHER:PTHR31874:SF6	PFAM:PF06203	PFscan:PS51017	ProteinID:AQK51006.1	SEG:seg
UniParc:UPI000220D0CB	UniProt:K7U1I6	MapMan:35.2	:	:	:

Description

Zinc finger protein CONSTANS-LIKE 7

Coordinates

chr4:+:38762363..38763520

Molecular Weight (calculated)

29448.6 Da

IEP (calculated)

10.882

GRAVY (calculated)

-0.770

Length

271 amino acids

Sequence
(BLAST)

001: MARGQRRRRR RRPEPRARAS GKGKKARYLS LSDLMVKAEV GATPPRSGCE EAGVKPEEED ARGDGQQRQV EPFAPHHHHE ASTLFEALPA PSLSDILGPS
101: PSPSPDGAGS GASGLPGADE EDLPRRALRG RERWVYCSGD SSFSPASTPP ATATATTSSP SPPCSSSAAS TGASARSLLL KLDYEEILAA WADRGPLYIG
201: AGSDLQLDAA QVASGRAERV RRYKEKRRRR LFAKRIRYEV RRANAVKRPR FKVVTNSSPH VLSWDALQGR F

Best Arabidopsis Sequence Match ( AT5G14370.1 )
(BLAST)

001: MCSNKASPVV GEEKQSTRSS KRIKKRKNRE ATTTMEDKSS SNLDASRKIR TKTKKPKFLS LKLELNTSHE INENPRSKKS KKKNNNKKQS KKKEPDTTPF
101: KEKKRAETTT TLGGGEKEEE QYDTVAAYLF NSATDSTISS IHDLLPSSAA TDVDCGGERN NLSPYDRQDH GSSSSSLLRT AMRKGASEEE ETTEERWVSY
201: SEVVEEVMSR SGTPRCCGGG DGNDGRPSLA LKLDYEQIME AWSDKGTLYV DGEPPQTVPD LHASADGFND GGEAGNLWAV PEMETTERLW RGHREASLLR
301: YKEKRQNRLF SKRIRYQVRK LNAEKRPRVK GRFVKREDS

Arabidopsis Description

CCT motif family protein [Source:UniProtKB/TrEMBL;Acc:Q949T9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.