Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69586 | Canola | nucleus, plastid | 93.35 | 93.64 |
| CDX70561 | Canola | nucleus | 40.48 | 88.74 |
| CDX85600 | Canola | nucleus | 76.44 | 79.56 |
| CDX91067 | Canola | nucleus | 77.04 | 78.95 |
| CDX78575 | Canola | nucleus | 68.58 | 75.42 |
| Bra008763.1-P | Field mustard | nucleus, plastid | 92.45 | 57.2 |
| GSMUA_Achr11P... | Banana | nucleus | 24.47 | 42.86 |
| VIT_14s0219g00220.t01 | Wine grape | nucleus, plastid | 39.27 | 41.94 |
| HORVU2Hr1G056960.1 | Barley | peroxisome | 11.78 | 37.14 |
| KRH07084 | Soybean | plastid | 36.56 | 34.18 |
| Solyc02g093590.2.1 | Tomato | nucleus | 32.02 | 33.12 |
| GSMUA_Achr10P... | Banana | nucleus | 28.7 | 32.99 |
| KRG94369 | Soybean | plastid | 35.05 | 32.77 |
| PGSC0003DMT400032849 | Potato | nucleus | 30.82 | 31.58 |
| CDY66177 | Canola | nucleus | 18.73 | 31.47 |
| CDY06672 | Canola | nucleus | 19.03 | 31.19 |
| CDY15597 | Canola | nucleus | 18.43 | 31.12 |
| CDY10244 | Canola | nucleus | 18.73 | 30.69 |
| CDX77359 | Canola | nucleus | 14.8 | 30.62 |
| Zm00001d035134_P001 | Maize | plastid | 22.05 | 27.34 |
| Zm00001d049651_P001 | Maize | mitochondrion, nucleus, peroxisome, plastid | 22.36 | 27.31 |
| KXG24303 | Sorghum | mitochondrion, nucleus | 24.17 | 27.12 |
| TraesCS7D01G311500.1 | Wheat | nucleus | 22.96 | 26.21 |
| TraesCS7B01G215100.1 | Wheat | nucleus | 22.96 | 25.76 |
| CDY07383 | Canola | cytosol | 17.52 | 25.22 |
| TraesCS7A01G314300.1 | Wheat | nucleus | 22.66 | 25.17 |
| CDY04230 | Canola | nucleus | 16.62 | 23.91 |
| CDY42769 | Canola | nucleus | 16.62 | 23.61 |
| Os08t0119700-00 | Rice | plastid | 24.77 | 23.16 |
| CDY66242 | Canola | nucleus | 18.73 | 19.75 |
| CDY65591 | Canola | nucleus | 19.94 | 18.97 |
| CDY03851 | Canola | nucleus | 21.15 | 18.82 |
| CDY67920 | Canola | nucleus | 19.64 | 18.68 |
| CDY53119 | Canola | nucleus | 20.85 | 18.35 |
| CDY51133 | Canola | nucleus | 20.85 | 18.3 |
| CDY42238 | Canola | nucleus | 20.85 | 17.88 |
| HORVU7Hr1G074960.1 | Barley | nucleus | 12.08 | 17.7 |
| CDY47926 | Canola | nucleus | 20.85 | 17.6 |
| CDX81527 | Canola | nucleus | 21.15 | 17.46 |
| CDY44890 | Canola | nucleus | 21.15 | 17.46 |
| CDY24402 | Canola | nucleus | 18.43 | 16.53 |
| CDY52734 | Canola | nucleus, plastid | 19.64 | 16.33 |
| CDX89377 | Canola | plastid | 18.73 | 16.23 |
| CDY38274 | Canola | nucleus, plastid | 19.34 | 16.12 |
| CDX94392 | Canola | plastid | 18.13 | 15.62 |
| CDX92740 | Canola | plastid | 18.43 | 15.37 |
| HORVU7Hr1G074920.1 | Barley | extracellular, mitochondrion | 13.29 | 14.77 |
| CDY36106 | Canola | nucleus | 14.5 | 12.5 |
| CDY04231 | Canola | mitochondrion | 0.6 | 4.55 |
| CDY07382 | Canola | nucleus | 0.6 | 4.55 |
Protein Annotations
| EnsemblPlants:CDY09849 | EnsemblPlantsGene:GSBRNA2T00031590001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:CCT_domain | InterPro:IPR010402 | PANTHER:PTHR31874 |
| PANTHER:PTHR31874:SF18 | PFAM:PF06203 | PFscan:PS51017 | ProteinID:CDY09849 | ProteinID:CDY09849.1 | SEG:seg |
| UniParc:UPI0004EE1B2F | UniProt:A0A078FA19 | MapMan:15.5.1.2 | : | : | : |
Description
BnaC09g43120DBnaC09g43120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FA19]
Coordinates
chrLK031999:-:541965..543919
Molecular Weight (calculated)
37447.1 Da
IEP (calculated)
10.275
GRAVY (calculated)
-1.152
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MCSLTSPAGE VNQSKRRSKR IRKRKQMEST YMDKSPSNPE TSRKQIRKKT KRPKFLSLKL ELGTSHEIEE SPGATKSKKK KKHKPSQQSK TKGVDTTPFK
101: KNKRAETVGG EKEEEQYDTV AAYLFSSATD SSMSSIQDLL PSSADHVDCG GGRNLPPYDR REHGGSSSSS LLKTAMRKGA SKEEETTEER WVSYSEVVEE
201: VMSRSGTPRC CGGDGKDGRR SLALKLDYEQ IMEAWSDKGT LYVDGEPPQT VPDLHASADV FTGGGDSGSL WTVPEMETTE RLWRGHREAS LLRYKEKRQN
301: RLFSKRIRYE VRKLNAEKRP RVKGRFVKRD D
101: KNKRAETVGG EKEEEQYDTV AAYLFSSATD SSMSSIQDLL PSSADHVDCG GGRNLPPYDR REHGGSSSSS LLKTAMRKGA SKEEETTEER WVSYSEVVEE
201: VMSRSGTPRC CGGDGKDGRR SLALKLDYEQ IMEAWSDKGT LYVDGEPPQT VPDLHASADV FTGGGDSGSL WTVPEMETTE RLWRGHREAS LLRYKEKRQN
301: RLFSKRIRYE VRKLNAEKRP RVKGRFVKRD D
001: MCSNKASPVV GEEKQSTRSS KRIKKRKNRE ATTTMEDKSS SNLDASRKIR TKTKKPKFLS LKLELNTSHE INENPRSKKS KKKNNNKKQS KKKEPDTTPF
101: KEKKRAETTT TLGGGEKEEE QYDTVAAYLF NSATDSTISS IHDLLPSSAA TDVDCGGERN NLSPYDRQDH GSSSSSLLRT AMRKGASEEE ETTEERWVSY
201: SEVVEEVMSR SGTPRCCGGG DGNDGRPSLA LKLDYEQIME AWSDKGTLYV DGEPPQTVPD LHASADGFND GGEAGNLWAV PEMETTERLW RGHREASLLR
301: YKEKRQNRLF SKRIRYQVRK LNAEKRPRVK GRFVKREDS
101: KEKKRAETTT TLGGGEKEEE QYDTVAAYLF NSATDSTISS IHDLLPSSAA TDVDCGGERN NLSPYDRQDH GSSSSSLLRT AMRKGASEEE ETTEERWVSY
201: SEVVEEVMSR SGTPRCCGGG DGNDGRPSLA LKLDYEQIME AWSDKGTLYV DGEPPQTVPD LHASADGFND GGEAGNLWAV PEMETTERLW RGHREASLLR
301: YKEKRQNRLF SKRIRYQVRK LNAEKRPRVK GRFVKREDS
Arabidopsis Description
CCT motif family protein [Source:UniProtKB/TrEMBL;Acc:Q949T9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.