Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032273.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| AT1G49130.1 | Thale cress | nucleus | 71.66 | 69.02 |
| CDY07382 | Canola | nucleus | 6.37 | 45.45 |
| CDY04231 | Canola | mitochondrion | 6.37 | 45.45 |
| CDX77359 | Canola | nucleus | 16.24 | 31.88 |
| CDY10244 | Canola | nucleus | 20.06 | 31.19 |
| CDY06672 | Canola | nucleus | 20.06 | 31.19 |
| CDY15597 | Canola | nucleus | 18.79 | 30.1 |
| CDY66177 | Canola | nucleus | 18.79 | 29.95 |
| CDX70561 | Canola | nucleus | 14.33 | 29.8 |
| CDY67920 | Canola | nucleus | 29.3 | 26.44 |
| CDY65591 | Canola | nucleus | 29.3 | 26.44 |
| CDY03851 | Canola | nucleus | 30.25 | 25.54 |
| CDY51133 | Canola | nucleus | 29.62 | 24.67 |
| CDY53119 | Canola | nucleus | 29.3 | 24.47 |
| CDY44890 | Canola | nucleus | 30.25 | 23.69 |
| CDY07383 | Canola | cytosol | 17.2 | 23.48 |
| CDX81527 | Canola | nucleus | 29.94 | 23.44 |
| CDY24402 | Canola | nucleus | 27.39 | 23.31 |
| CDY04230 | Canola | nucleus | 16.56 | 22.61 |
| CDY42769 | Canola | nucleus | 14.33 | 19.31 |
| CDY36106 | Canola | nucleus | 23.57 | 19.27 |
| CDX78575 | Canola | nucleus | 18.15 | 18.94 |
| CDY09849 | Canola | nucleus | 19.75 | 18.73 |
| CDX69586 | Canola | nucleus, plastid | 19.43 | 18.48 |
| CDX85600 | Canola | nucleus | 18.47 | 18.24 |
| CDX91067 | Canola | nucleus | 18.47 | 17.96 |
| CDY52734 | Canola | nucleus, plastid | 19.43 | 15.33 |
| CDY38274 | Canola | nucleus, plastid | 19.11 | 15.11 |
| CDY42238 | Canola | nucleus | 18.47 | 15.03 |
| CDX89377 | Canola | plastid | 18.15 | 14.92 |
| CDX94392 | Canola | plastid | 18.15 | 14.84 |
| CDY47926 | Canola | nucleus | 18.47 | 14.8 |
| CDX92740 | Canola | plastid | 18.15 | 14.36 |
Protein Annotations
| MapMan:15.5.1.2 | GO:A0A078JLI5 | UniProt:A0A078JLI5 | InterPro:CCT_domain | EnsemblPlants:CDY66242 | ProteinID:CDY66242 |
| ProteinID:CDY66242.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008270 | EnsemblPlantsGene:GSBRNA2T00052368001 | InterPro:IPR000315 | InterPro:IPR010402 |
| PFAM:PF00643 | PFAM:PF06203 | PFscan:PS50119 | PFscan:PS51017 | PANTHER:PTHR31874 | PANTHER:PTHR31874:SF19 |
| SMART:SM00336 | UniParc:UPI0002547C9B | InterPro:Znf_B-box | : | : | : |
Description
BnaA05g36570DZinc finger protein CONSTANS-LIKE 8 [Source:Projected from Arabidopsis thaliana (AT1G49130) UniProtKB/Swiss-Prot;Acc:Q9M9B3]
Coordinates
chrLK035164:-:4731..6140
Molecular Weight (calculated)
37091.2 Da
IEP (calculated)
6.431
GRAVY (calculated)
-1.127
Length
314 amino acids
Sequence
(BLAST)
(BLAST)
001: MIPERQEDVK RPRDCELCLN KHAVWYCASD DAFLCHVCDE SVHRANQVAT KHDRVCLKTN EISNGVLQGT ARKPVWHSWF RRKPRTPRVR CERKPQGKVD
101: DERRREGPHV PEIGGETNEE DENLTSLVPE FQGFIEMEFF LNNHDGSEET MRQFNVDHET DEMEDLCYIE EEGKTNGDEA CHEQSLTSCK NEYDINPTLV
201: TTKTEENAKQ RNLLLRLNYE NVIAAWDKQE SPTTATWNQN EFSNTSNFQL VPPGIEEEKV SNRSEREARV WRYRDKRKNR LFEKKIRYEV RKVNADKRPR
301: IKGRFVRRSL TNDF
101: DERRREGPHV PEIGGETNEE DENLTSLVPE FQGFIEMEFF LNNHDGSEET MRQFNVDHET DEMEDLCYIE EEGKTNGDEA CHEQSLTSCK NEYDINPTLV
201: TTKTEENAKQ RNLLLRLNYE NVIAAWDKQE SPTTATWNQN EFSNTSNFQL VPPGIEEEKV SNRSEREARV WRYRDKRKNR LFEKKIRYEV RKVNADKRPR
301: IKGRFVRRSL TNDF
001: MTSHQNIKIS EKIMISKYQE DVKQPRACEL CLNKHAVWYC ASDDAFLCHV CDESVHSANH VATKHERVCL RTNEISNDVR GGTTLTSVWH SGFRRKARTP
101: RSRYEKKPQQ KIDDERRRED PRVPEIGGEV MFFIPEANDD DMTSLVPEFE GFTEMGFFLS NHNGTEETTK QFNFEEEADT MEDLYYNGEE EDKTDGAEAC
201: PGQYLMSCKK DYDNVITVSE KTEEIEDCYE NNARHRLNYE NVIAAWDKQE SPRDVKNNTS SFQLVPPGIE EKRVRSEREA RVWRYRDKRK NRLFEKKIRY
301: EVRKVNADKR PRMKGRFVRR SLAIDS
101: RSRYEKKPQQ KIDDERRRED PRVPEIGGEV MFFIPEANDD DMTSLVPEFE GFTEMGFFLS NHNGTEETTK QFNFEEEADT MEDLYYNGEE EDKTDGAEAC
201: PGQYLMSCKK DYDNVITVSE KTEEIEDCYE NNARHRLNYE NVIAAWDKQE SPRDVKNNTS SFQLVPPGIE EKRVRSEREA RVWRYRDKRK NRLFEKKIRY
301: EVRKVNADKR PRMKGRFVRR SLAIDS
Arabidopsis Description
B-box type zinc finger protein with CCT domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4I1N0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.