Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67920 | Canola | nucleus | 95.11 | 95.11 |
| CDY07382 | Canola | nucleus | 10.92 | 86.36 |
| Bra024750.1-P | Field mustard | nucleus | 97.99 | 82.37 |
| CDY04231 | Canola | mitochondrion | 10.34 | 81.82 |
| CDY51133 | Canola | nucleus | 83.91 | 77.45 |
| CDY53119 | Canola | nucleus | 82.76 | 76.6 |
| CDY03851 | Canola | nucleus | 80.75 | 75.54 |
| AT1G25440.1 | Thale cress | nucleus | 83.05 | 69.3 |
| CDX77359 | Canola | nucleus | 29.6 | 64.38 |
| CDY04230 | Canola | nucleus | 37.64 | 56.96 |
| CDY07383 | Canola | cytosol | 36.21 | 54.78 |
| KRH13468 | Soybean | cytosol | 15.52 | 54.55 |
| CDX81527 | Canola | nucleus | 61.49 | 53.37 |
| CDY44890 | Canola | nucleus | 61.49 | 53.37 |
| CDY24402 | Canola | nucleus | 51.72 | 48.78 |
| VIT_01s0011g03520.t01 | Wine grape | nucleus | 51.44 | 41.44 |
| CDY36106 | Canola | nucleus | 45.4 | 41.15 |
| GSMUA_Achr4P30670_001 | Banana | nucleus | 42.82 | 40.6 |
| KRH35955 | Soybean | nucleus | 48.56 | 40.33 |
| KRG90815 | Soybean | nucleus | 47.13 | 39.23 |
| GSMUA_Achr7P18710_001 | Banana | plastid | 42.53 | 39.05 |
| GSMUA_Achr10P... | Banana | nucleus | 42.53 | 38.74 |
| Solyc04g007210.2.1 | Tomato | nucleus | 47.13 | 38.32 |
| GSMUA_Achr10P... | Banana | nucleus | 38.22 | 37.89 |
| GSMUA_Achr7P12560_001 | Banana | nucleus | 36.21 | 37.84 |
| Solyc05g009310.2.1 | Tomato | nucleus | 46.84 | 37.3 |
| PGSC0003DMT400037755 | Potato | nucleus | 47.41 | 36.91 |
| TraesCS7D01G209000.1 | Wheat | nucleus | 43.97 | 35.42 |
| TraesCS4A01G268500.1 | Wheat | nucleus, plastid | 41.67 | 35.37 |
| TraesCS4D01G046200.1 | Wheat | nucleus, plastid | 41.67 | 35.37 |
| HORVU4Hr1G007420.1 | Barley | nucleus, plastid | 41.67 | 35.37 |
| TraesCS4B01G045700.1 | Wheat | nucleus, plastid | 41.67 | 35.28 |
| TraesCS7A01G206200.1 | Wheat | nucleus | 43.68 | 35.19 |
| Zm00001d037327_P001 | Maize | mitochondrion, nucleus | 45.69 | 35.18 |
| TraesCS7B01G113400.1 | Wheat | nucleus | 43.39 | 34.95 |
| Os03t0711100-01 | Rice | plastid | 41.38 | 34.2 |
| Zm00001d013443_P001 | Maize | plastid | 40.52 | 34.14 |
| Zm00001d045661_P001 | Maize | nucleus | 44.54 | 33.99 |
| EER93585 | Sorghum | plastid | 40.8 | 33.81 |
| Os06t0264200-00 | Rice | plastid | 45.98 | 33.26 |
| EER88191 | Sorghum | nucleus, plastid | 45.11 | 33.12 |
| TraesCS6D01G274100.1 | Wheat | nucleus | 41.09 | 32.95 |
| TraesCS6B01G323400.1 | Wheat | nucleus | 40.52 | 32.94 |
| TraesCS6A01G293200.1 | Wheat | nucleus | 40.23 | 32.86 |
| Os02t0731700-02 | Rice | nucleus | 42.24 | 32.52 |
| Zm00001d017939_P001 | Maize | nucleus | 42.82 | 32.04 |
| EES05581 | Sorghum | nucleus, plastid | 43.39 | 30.94 |
| Zm00001d033719_P001 | Maize | plastid | 40.52 | 29.94 |
| CDX70561 | Canola | nucleus | 12.93 | 29.8 |
| CDY66242 | Canola | nucleus | 26.44 | 29.3 |
| HORVU6Hr1G073170.1 | Barley | nucleus | 40.8 | 28.51 |
| PGSC0003DMT400020030 | Potato | nucleus | 44.25 | 27.35 |
| CDY15597 | Canola | nucleus | 14.37 | 25.51 |
| CDY66177 | Canola | nucleus | 14.37 | 25.38 |
| CDY06672 | Canola | nucleus | 14.08 | 24.26 |
| CDY10244 | Canola | nucleus | 13.79 | 23.76 |
| CDX69586 | Canola | nucleus, plastid | 19.25 | 20.3 |
| CDX78575 | Canola | nucleus | 17.53 | 20.27 |
| CDY09849 | Canola | nucleus | 18.97 | 19.94 |
| CDY42769 | Canola | nucleus | 12.93 | 19.31 |
| CDX85600 | Canola | nucleus | 17.53 | 19.18 |
| CDY38274 | Canola | nucleus, plastid | 21.55 | 18.89 |
| CDX91067 | Canola | nucleus | 17.24 | 18.58 |
| CDY47926 | Canola | nucleus | 20.69 | 18.37 |
| CDY52734 | Canola | nucleus, plastid | 20.98 | 18.34 |
| CDY42238 | Canola | nucleus | 19.83 | 17.88 |
| CDX89377 | Canola | plastid | 18.97 | 17.28 |
| CDX94392 | Canola | plastid | 18.97 | 17.19 |
| CDX92740 | Canola | plastid | 18.97 | 16.62 |
Protein Annotations
| MapMan:15.5.1.2 | GO:A0A078JII7 | UniProt:A0A078JII7 | InterPro:CCT_domain | EnsemblPlants:CDY65591 | ProteinID:CDY65591 |
| ProteinID:CDY65591.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008270 | EnsemblPlantsGene:GSBRNA2T00046865001 | InterPro:IPR000315 | InterPro:IPR010402 |
| PFAM:PF00643 | PFAM:PF06203 | PFscan:PS50119 | PFscan:PS51017 | PANTHER:PTHR31874 | PANTHER:PTHR31874:SF21 |
| SMART:SM00336 | UniParc:UPI0004EF32A3 | InterPro:Znf_B-box | SEG:seg | : | : |
Description
BnaC05g50730DBnaC05g50730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JII7]
Coordinates
chrLK034848:-:13040..18852
Molecular Weight (calculated)
38725.7 Da
IEP (calculated)
6.253
GRAVY (calculated)
-0.582
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNLANAVGA KTARACDSCV KKRARWYCAA DDAFLCQSCD TLVHSANPLA RRHERVRLKS ASPVATKYSS HNHSASSPPL EAATWHQGFT RKPRTPRGSG
101: KKNNLSIFHD LVPEISAEDQ TDSYEIEELL ICQVPVLDPM VAEQFLNDVI EPKIEFPMIT IDDQEDEDNA ESCLNGFFPT DMELEEFAAD VEILLAMNMG
201: IGCGEDRGDG DGTVKEEEQK NVLMLSLNYE SVISTWGGQG QPWMSGEPPE RDIDISDKPV VSMEINGGES HHKHYVGGCL PSSGFGDGGR EARVSRYREK
301: RRTRLFSKKI RYEVRKLNAE KRPRMKGRFV KRASLALSAA SSPLGVNY
101: KKNNLSIFHD LVPEISAEDQ TDSYEIEELL ICQVPVLDPM VAEQFLNDVI EPKIEFPMIT IDDQEDEDNA ESCLNGFFPT DMELEEFAAD VEILLAMNMG
201: IGCGEDRGDG DGTVKEEEQK NVLMLSLNYE SVISTWGGQG QPWMSGEPPE RDIDISDKPV VSMEINGGES HHKHYVGGCL PSSGFGDGGR EARVSRYREK
301: RRTRLFSKKI RYEVRKLNAE KRPRMKGRFV KRASLALSAA SSPLGVNY
001: MMKSLANAVG AKTARACDSC VKRRARWYCA ADDAFLCQSC DSLVHSANPL ARRHERVRLK TASPAVVKHS NHSSASPPHE VATWHHGFTR KARTPRGSGK
101: KNNSSIFHDL VPDISIEDQT DNYELEEQLI CQVPVLDPLV SEQFLNDVVE PKIEFPMIRS GLMIEEEEDN AESCLNGFFP TDMELEEFAA DVETLLGRGL
201: DTESYAMEEL GLSNSEMFKI EKDEIEEEVE EIKAMSMDIF DDDRKDVDGT VPFELSFDYE SSHKTSEEEV MKNVESSGEC VVKVKEEEHK NVLMLRLNYD
301: SVISTWGGQG PPWSSGEPPE RDMDISGWPA FSMVENGGES THQKQYVGGC LPSSGFGDGG REARVSRYRE KRRTRLFSKK IRYEVRKLNA EKRPRMKGRF
401: VKRASLAAAA SPLGVNY
101: KNNSSIFHDL VPDISIEDQT DNYELEEQLI CQVPVLDPLV SEQFLNDVVE PKIEFPMIRS GLMIEEEEDN AESCLNGFFP TDMELEEFAA DVETLLGRGL
201: DTESYAMEEL GLSNSEMFKI EKDEIEEEVE EIKAMSMDIF DDDRKDVDGT VPFELSFDYE SSHKTSEEEV MKNVESSGEC VVKVKEEEHK NVLMLRLNYD
301: SVISTWGGQG PPWSSGEPPE RDMDISGWPA FSMVENGGES THQKQYVGGC LPSSGFGDGG REARVSRYRE KRRTRLFSKK IRYEVRKLNA EKRPRMKGRF
401: VKRASLAAAA SPLGVNY
Arabidopsis Description
COL16Zinc finger protein CONSTANS-LIKE 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWD0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.