Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010994.1-P | Field mustard | nucleus | 96.88 | 91.4 |
| CDY24402 | Canola | nucleus | 83.85 | 87.26 |
| CDY07382 | Canola | nucleus | 7.29 | 63.64 |
| CDY04231 | Canola | mitochondrion | 7.29 | 63.64 |
| CDY65591 | Canola | nucleus | 41.15 | 45.4 |
| CDY03851 | Canola | nucleus | 43.23 | 44.62 |
| CDY67920 | Canola | nucleus | 40.36 | 44.54 |
| KRH13468 | Soybean | cytosol | 11.2 | 43.43 |
| CDY51133 | Canola | nucleus | 41.67 | 42.44 |
| CDY53119 | Canola | nucleus | 40.62 | 41.49 |
| AT1G25440.1 | Thale cress | nucleus | 44.27 | 40.77 |
| CDY07383 | Canola | cytosol | 22.92 | 38.26 |
| CDX77359 | Canola | nucleus | 15.62 | 37.5 |
| CDX81527 | Canola | nucleus | 38.02 | 36.41 |
| CDY44890 | Canola | nucleus | 37.5 | 35.91 |
| GSMUA_Achr4P30670_001 | Banana | nucleus | 32.55 | 34.06 |
| GSMUA_Achr10P... | Banana | nucleus | 30.99 | 33.9 |
| CDY04230 | Canola | nucleus | 20.05 | 33.48 |
| KRH35955 | Soybean | nucleus | 36.46 | 33.41 |
| VIT_01s0011g03520.t01 | Wine grape | nucleus | 36.98 | 32.87 |
| GSMUA_Achr10P... | Banana | nucleus | 32.29 | 32.46 |
| GSMUA_Achr7P18710_001 | Banana | plastid | 32.03 | 32.45 |
| KRG90815 | Soybean | nucleus | 35.16 | 32.3 |
| Solyc04g007210.2.1 | Tomato | nucleus | 35.94 | 32.24 |
| Solyc05g009310.2.1 | Tomato | nucleus | 35.68 | 31.35 |
| GSMUA_Achr7P12560_001 | Banana | nucleus | 26.56 | 30.63 |
| PGSC0003DMT400037755 | Potato | nucleus | 35.42 | 30.43 |
| Zm00001d013443_P001 | Maize | plastid | 31.51 | 29.3 |
| TraesCS7D01G209000.1 | Wheat | nucleus | 32.81 | 29.17 |
| Zm00001d037327_P001 | Maize | mitochondrion, nucleus | 34.11 | 28.98 |
| Os03t0711100-01 | Rice | plastid | 31.77 | 28.98 |
| TraesCS7A01G206200.1 | Wheat | nucleus | 32.55 | 28.94 |
| EER93585 | Sorghum | plastid | 31.51 | 28.81 |
| Zm00001d045661_P001 | Maize | nucleus | 34.11 | 28.73 |
| TraesCS7B01G113400.1 | Wheat | nucleus | 32.29 | 28.7 |
| TraesCS6B01G323400.1 | Wheat | nucleus | 31.51 | 28.27 |
| TraesCS6A01G293200.1 | Wheat | nucleus | 31.25 | 28.17 |
| TraesCS4A01G268500.1 | Wheat | nucleus, plastid | 29.95 | 28.05 |
| TraesCS4B01G045700.1 | Wheat | nucleus, plastid | 29.95 | 27.98 |
| TraesCS6D01G274100.1 | Wheat | nucleus | 31.51 | 27.88 |
| TraesCS4D01G046200.1 | Wheat | nucleus, plastid | 29.69 | 27.8 |
| HORVU4Hr1G007420.1 | Barley | nucleus, plastid | 29.43 | 27.56 |
| Os02t0731700-02 | Rice | nucleus | 32.29 | 27.43 |
| Zm00001d017939_P001 | Maize | nucleus | 32.55 | 26.88 |
| Os06t0264200-00 | Rice | plastid | 33.33 | 26.61 |
| EER88191 | Sorghum | nucleus, plastid | 32.81 | 26.58 |
| Zm00001d033719_P001 | Maize | plastid | 31.51 | 25.69 |
| PGSC0003DMT400020030 | Potato | nucleus | 36.46 | 24.87 |
| EES05581 | Sorghum | nucleus, plastid | 31.51 | 24.8 |
| HORVU6Hr1G073170.1 | Barley | nucleus | 31.51 | 24.3 |
| CDY66242 | Canola | nucleus | 19.27 | 23.57 |
| CDY15597 | Canola | nucleus | 9.64 | 18.88 |
| CDY66177 | Canola | nucleus | 9.64 | 18.78 |
| CDX70561 | Canola | nucleus | 7.03 | 17.88 |
| CDY10244 | Canola | nucleus | 9.38 | 17.82 |
| CDY06672 | Canola | nucleus | 9.11 | 17.33 |
| CDY42769 | Canola | nucleus | 10.42 | 17.17 |
| CDY47926 | Canola | nucleus | 16.15 | 15.82 |
| CDY42238 | Canola | nucleus | 15.89 | 15.8 |
| CDY38274 | Canola | nucleus, plastid | 15.89 | 15.37 |
| CDY52734 | Canola | nucleus, plastid | 15.62 | 15.08 |
| CDX78575 | Canola | nucleus | 11.46 | 14.62 |
| CDX92740 | Canola | plastid | 15.1 | 14.61 |
| CDX94392 | Canola | plastid | 14.58 | 14.58 |
| CDX69586 | Canola | nucleus, plastid | 12.5 | 14.55 |
| CDY09849 | Canola | nucleus | 12.5 | 14.5 |
| CDX85600 | Canola | nucleus | 11.72 | 14.15 |
| CDX89377 | Canola | plastid | 14.06 | 14.14 |
| CDX91067 | Canola | nucleus | 11.2 | 13.31 |
Protein Annotations
| MapMan:15.5.1.2 | GO:A0A078HE99 | UniProt:A0A078HE99 | InterPro:CCT_domain | EnsemblPlants:CDY36106 | ProteinID:CDY36106 |
| ProteinID:CDY36106.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0008270 | EnsemblPlantsGene:GSBRNA2T00059945001 | InterPro:IPR000315 | InterPro:IPR010402 | PFAM:PF00643 |
| PFAM:PF06203 | PFscan:PS50119 | PANTHER:PTHR31874 | PANTHER:PTHR31874:SF21 | SMART:SM00336 | UniParc:UPI0004EF36DC |
| InterPro:Znf_B-box | SEG:seg | : | : | : | : |
Description
BnaA08g19420DBnaA08g19420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HE99]
Coordinates
chrLK032367:+:145321..149097
Molecular Weight (calculated)
42668.5 Da
IEP (calculated)
6.517
GRAVY (calculated)
-0.672
Length
384 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSLANCVRA KTARTCDNCL KKQAHWFCAA DEAFLCQSCD TSVHSANLLA RRHERVRLKD STSPQQEAPT WYHGFTRKPR TPRGSGKRNN SSTFQDMVPE
101: ISAEGQTDSS EVEGPLICQV PVLGPTVVEP KIKFPTMRSG VMIDGHEDED KDESCLNGIF PTNMEVEDFA ADVETLLGHG LDKESYTLEE LGLSNTEMFK
201: KDEIEDKETK AMNMDIEIGD DDQGNRDGTL PGECVQAKEE KKKNVLMLSL DYDQVISTWG GQGLPWTSGG PPELDINISG SPVVSKVSKR DNGRKSRKKR
301: RVGGCLPSSV VGDGGREASV SRYREKKKTR SFTKTIRYET VVPYDKETEE EVIAVLKIAM ACLSISPEKS LSTKRNIKII CYSK
101: ISAEGQTDSS EVEGPLICQV PVLGPTVVEP KIKFPTMRSG VMIDGHEDED KDESCLNGIF PTNMEVEDFA ADVETLLGHG LDKESYTLEE LGLSNTEMFK
201: KDEIEDKETK AMNMDIEIGD DDQGNRDGTL PGECVQAKEE KKKNVLMLSL DYDQVISTWG GQGLPWTSGG PPELDINISG SPVVSKVSKR DNGRKSRKKR
301: RVGGCLPSSV VGDGGREASV SRYREKKKTR SFTKTIRYET VVPYDKETEE EVIAVLKIAM ACLSISPEKS LSTKRNIKII CYSK
001: MMKSLANAVG AKTARACDSC VKRRARWYCA ADDAFLCQSC DSLVHSANPL ARRHERVRLK TASPAVVKHS NHSSASPPHE VATWHHGFTR KARTPRGSGK
101: KNNSSIFHDL VPDISIEDQT DNYELEEQLI CQVPVLDPLV SEQFLNDVVE PKIEFPMIRS GLMIEEEEDN AESCLNGFFP TDMELEEFAA DVETLLGRGL
201: DTESYAMEEL GLSNSEMFKI EKDEIEEEVE EIKAMSMDIF DDDRKDVDGT VPFELSFDYE SSHKTSEEEV MKNVESSGEC VVKVKEEEHK NVLMLRLNYD
301: SVISTWGGQG PPWSSGEPPE RDMDISGWPA FSMVENGGES THQKQYVGGC LPSSGFGDGG REARVSRYRE KRRTRLFSKK IRYEVRKLNA EKRPRMKGRF
401: VKRASLAAAA SPLGVNY
101: KNNSSIFHDL VPDISIEDQT DNYELEEQLI CQVPVLDPLV SEQFLNDVVE PKIEFPMIRS GLMIEEEEDN AESCLNGFFP TDMELEEFAA DVETLLGRGL
201: DTESYAMEEL GLSNSEMFKI EKDEIEEEVE EIKAMSMDIF DDDRKDVDGT VPFELSFDYE SSHKTSEEEV MKNVESSGEC VVKVKEEEHK NVLMLRLNYD
301: SVISTWGGQG PPWSSGEPPE RDMDISGWPA FSMVENGGES THQKQYVGGC LPSSGFGDGG REARVSRYRE KRRTRLFSKK IRYEVRKLNA EKRPRMKGRF
401: VKRASLAAAA SPLGVNY
Arabidopsis Description
COL16Zinc finger protein CONSTANS-LIKE 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWD0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.