Subcellular Localization
min:
: max
Winner_takes_all: nucleus, plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- nucleus 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09849 | Canola | nucleus | 93.64 | 93.35 |
| CDX70561 | Canola | nucleus | 40.0 | 87.42 |
| CDX91067 | Canola | nucleus | 77.27 | 78.95 |
| CDX85600 | Canola | nucleus | 76.06 | 78.93 |
| CDX78575 | Canola | nucleus | 70.0 | 76.74 |
| Bra008763.1-P | Field mustard | nucleus, plastid | 97.88 | 60.37 |
| GSMUA_Achr11P... | Banana | nucleus | 24.55 | 42.86 |
| VIT_14s0219g00220.t01 | Wine grape | nucleus, plastid | 39.7 | 42.26 |
| HORVU2Hr1G056960.1 | Barley | peroxisome | 11.82 | 37.14 |
| KRH07084 | Soybean | plastid | 36.97 | 34.46 |
| Solyc02g093590.2.1 | Tomato | nucleus | 32.12 | 33.12 |
| KRG94369 | Soybean | plastid | 35.45 | 33.05 |
| GSMUA_Achr10P... | Banana | nucleus | 28.48 | 32.64 |
| PGSC0003DMT400032849 | Potato | nucleus | 30.91 | 31.58 |
| CDY66177 | Canola | nucleus | 18.79 | 31.47 |
| CDX77359 | Canola | nucleus | 15.15 | 31.25 |
| CDY06672 | Canola | nucleus | 19.09 | 31.19 |
| CDY15597 | Canola | nucleus | 18.48 | 31.12 |
| CDY10244 | Canola | nucleus | 18.79 | 30.69 |
| Zm00001d049651_P001 | Maize | mitochondrion, nucleus, peroxisome, plastid | 22.73 | 27.68 |
| KXG24303 | Sorghum | mitochondrion, nucleus | 24.55 | 27.46 |
| Zm00001d035134_P001 | Maize | plastid | 21.82 | 26.97 |
| TraesCS7D01G311500.1 | Wheat | nucleus | 23.64 | 26.9 |
| TraesCS7A01G314300.1 | Wheat | nucleus | 23.33 | 25.84 |
| TraesCS7B01G215100.1 | Wheat | nucleus | 23.03 | 25.76 |
| CDY07383 | Canola | cytosol | 17.27 | 24.78 |
| Os08t0119700-00 | Rice | plastid | 25.45 | 23.73 |
| CDY42769 | Canola | nucleus | 16.67 | 23.61 |
| CDY04230 | Canola | nucleus | 16.36 | 23.48 |
| CDY66242 | Canola | nucleus | 18.48 | 19.43 |
| CDY65591 | Canola | nucleus | 20.3 | 19.25 |
| CDY67920 | Canola | nucleus | 20.0 | 18.97 |
| CDY03851 | Canola | nucleus | 21.21 | 18.82 |
| HORVU7Hr1G074960.1 | Barley | nucleus | 12.73 | 18.58 |
| CDY42238 | Canola | nucleus | 21.52 | 18.39 |
| CDY53119 | Canola | nucleus | 20.91 | 18.35 |
| CDY51133 | Canola | nucleus | 20.91 | 18.3 |
| CDY47926 | Canola | nucleus | 21.21 | 17.86 |
| CDX89377 | Canola | plastid | 20.0 | 17.28 |
| CDY44890 | Canola | nucleus | 20.91 | 17.21 |
| CDX81527 | Canola | nucleus | 20.91 | 17.21 |
| CDY52734 | Canola | nucleus, plastid | 20.3 | 16.83 |
| CDY38274 | Canola | nucleus, plastid | 20.0 | 16.62 |
| CDY24402 | Canola | nucleus | 18.48 | 16.53 |
| CDX92740 | Canola | plastid | 19.39 | 16.12 |
| CDX94392 | Canola | plastid | 18.18 | 15.62 |
| HORVU7Hr1G074920.1 | Barley | extracellular, mitochondrion | 13.94 | 15.44 |
| CDY36106 | Canola | nucleus | 14.55 | 12.5 |
| CDY04231 | Canola | mitochondrion | 0.61 | 4.55 |
| CDY07382 | Canola | nucleus | 0.61 | 4.55 |
Protein Annotations
| EnsemblPlants:CDX69586 | EnsemblPlantsGene:GSBRNA2T00135599001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:CCT_domain |
| InterPro:IPR010402 | PANTHER:PTHR31874 | PANTHER:PTHR31874:SF18 | PFAM:PF06203 | PFscan:PS51017 | ProteinID:CDX69586 |
| ProteinID:CDX69586.1 | SEG:seg | UniParc:UPI0004EDC1E1 | MapMan:15.5.1.2 | : | : |
Description
BnaA10g19350D
Coordinates
chrLK031790:+:912411..914305
Molecular Weight (calculated)
37433.2 Da
IEP (calculated)
10.352
GRAVY (calculated)
-1.133
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MCSLTSPAGE VNQSKRRSKR IKKRKQMEST SMDKSPSNLE TSRRQIRRKT KRPKFLSLKL ELGTSHEIEE SRGTTKSKKK KKKKQKQSKT KGVDTTAFKE
101: KKRAETVGGE KEEEHYDNVA AYLFSSATDS SMSSIQDLLP SSAVHVDCGG GRNLPPYDRQ EHGGSSSSSL LKTAMRKGAS KEEETTEERW VSYSEVVEEV
201: MSRSGTPRCC VGDGNDGRRS LALKLDYEQI MEAWSDKGTL YVDGEPPQTV PDLHGSADVF NGGGDSGSLW TVPEMETTER LWRGHREASL LRYKEKRQNR
301: LFSKRIRYEV RKLNAEKRPR VKGRFVKRDD
101: KKRAETVGGE KEEEHYDNVA AYLFSSATDS SMSSIQDLLP SSAVHVDCGG GRNLPPYDRQ EHGGSSSSSL LKTAMRKGAS KEEETTEERW VSYSEVVEEV
201: MSRSGTPRCC VGDGNDGRRS LALKLDYEQI MEAWSDKGTL YVDGEPPQTV PDLHGSADVF NGGGDSGSLW TVPEMETTER LWRGHREASL LRYKEKRQNR
301: LFSKRIRYEV RKLNAEKRPR VKGRFVKRDD
001: MCSNKASPVV GEEKQSTRSS KRIKKRKNRE ATTTMEDKSS SNLDASRKIR TKTKKPKFLS LKLELNTSHE INENPRSKKS KKKNNNKKQS KKKEPDTTPF
101: KEKKRAETTT TLGGGEKEEE QYDTVAAYLF NSATDSTISS IHDLLPSSAA TDVDCGGERN NLSPYDRQDH GSSSSSLLRT AMRKGASEEE ETTEERWVSY
201: SEVVEEVMSR SGTPRCCGGG DGNDGRPSLA LKLDYEQIME AWSDKGTLYV DGEPPQTVPD LHASADGFND GGEAGNLWAV PEMETTERLW RGHREASLLR
301: YKEKRQNRLF SKRIRYQVRK LNAEKRPRVK GRFVKREDS
101: KEKKRAETTT TLGGGEKEEE QYDTVAAYLF NSATDSTISS IHDLLPSSAA TDVDCGGERN NLSPYDRQDH GSSSSSLLRT AMRKGASEEE ETTEERWVSY
201: SEVVEEVMSR SGTPRCCGGG DGNDGRPSLA LKLDYEQIME AWSDKGTLYV DGEPPQTVPD LHASADGFND GGEAGNLWAV PEMETTERLW RGHREASLLR
301: YKEKRQNRLF SKRIRYQVRK LNAEKRPRVK GRFVKREDS
Arabidopsis Description
CCT motif family protein [Source:UniProtKB/TrEMBL;Acc:Q949T9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.