Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 71.96 | 47.22 |
| CDX70561 | Canola | nucleus | 35.98 | 45.03 |
| Bra023461.1-P | Field mustard | cytosol | 35.45 | 43.79 |
| HORVU2Hr1G056960.1 | Barley | peroxisome | 21.69 | 39.05 |
| Zm00001d049651_P001 | Maize | mitochondrion, nucleus, peroxisome, plastid | 36.51 | 25.46 |
| CDX69586 | Canola | nucleus, plastid | 42.86 | 24.55 |
| AT5G14370.1 | Thale cress | nucleus | 43.92 | 24.48 |
| CDY09849 | Canola | nucleus | 42.86 | 24.47 |
| Bra006252.1-P | Field mustard | nucleus | 38.62 | 24.25 |
| CDX78575 | Canola | nucleus | 38.62 | 24.25 |
| CDX85600 | Canola | nucleus | 40.74 | 24.21 |
| VIT_14s0219g00220.t01 | Wine grape | nucleus, plastid | 39.68 | 24.19 |
| CDX91067 | Canola | nucleus | 40.21 | 23.53 |
| Solyc02g093590.2.1 | Tomato | nucleus | 39.68 | 23.44 |
| KXG24303 | Sorghum | mitochondrion, nucleus | 36.51 | 23.39 |
| Zm00001d035134_P001 | Maize | plastid | 32.8 | 23.22 |
| TraesCS7D01G311500.1 | Wheat | nucleus | 34.92 | 22.76 |
| TraesCS7B01G215100.1 | Wheat | nucleus | 34.39 | 22.03 |
| PGSC0003DMT400032849 | Potato | nucleus | 37.57 | 21.98 |
| TraesCS7A01G314300.1 | Wheat | nucleus | 34.39 | 21.81 |
| KRH07084 | Soybean | plastid | 39.15 | 20.9 |
| KRG94369 | Soybean | plastid | 37.04 | 19.77 |
| Os08t0119700-00 | Rice | plastid | 34.39 | 18.36 |
| HORVU7Hr1G074920.1 | Barley | extracellular, mitochondrion | 23.81 | 15.1 |
| GSMUA_Achr7P12560_001 | Banana | nucleus | 26.45 | 15.02 |
| HORVU7Hr1G074960.1 | Barley | nucleus | 17.46 | 14.6 |
| Bra008763.1-P | Field mustard | nucleus, plastid | 41.27 | 14.58 |
| GSMUA_Achr10P... | Banana | nucleus | 26.45 | 14.24 |
| GSMUA_Achr7P18710_001 | Banana | plastid | 27.51 | 13.72 |
| GSMUA_Achr10P... | Banana | nucleus | 27.51 | 13.61 |
| GSMUA_Achr4P30670_001 | Banana | nucleus | 25.93 | 13.35 |
| GSMUA_Achr7P19660_001 | Banana | mitochondrion | 26.45 | 11.29 |
| GSMUA_Achr6P01780_001 | Banana | nucleus | 24.34 | 11.22 |
| GSMUA_Achr10P... | Banana | nucleus | 8.47 | 4.97 |
| Bra023462.1-P | Field mustard | nucleus | 1.59 | 1.89 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P08750_001 | EnsemblPlants:GSMUA_Achr11T08750_001 | EnsemblPlantsGene:GSMUA_Achr11G08750_001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:CCT_domain | InterPro:IPR010402 |
| PANTHER:PTHR31874 | PANTHER:PTHR31874:SF6 | PFAM:PF06203 | PFscan:PS51017 | SEG:seg | UniParc:UPI0002966D55 |
| UniProt:M0RQK5 | MapMan:15.5.1.2 | : | : | : | : |
Description
Putative CCT motif family protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G08750_001]
Coordinates
chr11:+:6756245..6758186
Molecular Weight (calculated)
21790.3 Da
IEP (calculated)
4.910
GRAVY (calculated)
-1.103
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MNREEEEEEE EEDEEEEGGD GDGLARRALR GRERWAYCRS SSSSSEEVAS SAAEGNGGVD LWRCVTPQAL ALKLDYEEIL AVWSDRGPLY MDGEGPQVVP
101: QLQHPCDSAV LPMLVEVGCR SWKVPEQPAE GKERSGMSRE ARVMRYKEKR RNRLFAKRIR YEVRKFNAEK RPRVKGRFVR RNDEDEDHS
101: QLQHPCDSAV LPMLVEVGCR SWKVPEQPAE GKERSGMSRE ARVMRYKEKR RNRLFAKRIR YEVRKFNAEK RPRVKGRFVR RNDEDEDHS
001: MCSNKASPVV GEEKQSTRSS KRIKKRKNRE ATTTMEDKSS SNLDASRKIR TKTKKPKFLS LKLELNTSHE INENPRSKKS KKKNNNKKQS KKKEPDTTPF
101: KEKKRAETTT TLGGGEKEEE QYDTVAAYLF NSATDSTISS IHDLLPSSAA TDVDCGGERN NLSPYDRQDH GSSSSSLLRT AMRKGASEEE ETTEERWVSY
201: SEVVEEVMSR SGTPRCCGGG DGNDGRPSLA LKLDYEQIME AWSDKGTLYV DGEPPQTVPD LHASADGFND GGEAGNLWAV PEMETTERLW RGHREASLLR
301: YKEKRQNRLF SKRIRYQVRK LNAEKRPRVK GRFVKREDS
101: KEKKRAETTT TLGGGEKEEE QYDTVAAYLF NSATDSTISS IHDLLPSSAA TDVDCGGERN NLSPYDRQDH GSSSSSLLRT AMRKGASEEE ETTEERWVSY
201: SEVVEEVMSR SGTPRCCGGG DGNDGRPSLA LKLDYEQIME AWSDKGTLYV DGEPPQTVPD LHASADGFND GGEAGNLWAV PEMETTERLW RGHREASLLR
301: YKEKRQNRLF SKRIRYQVRK LNAEKRPRVK GRFVKREDS
Arabidopsis Description
CCT motif family protein [Source:UniProtKB/TrEMBL;Acc:Q949T9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.