Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P01780_001 | Banana | nucleus | 68.63 | 53.9 |
| GSMUA_Achr7P19660_001 | Banana | mitochondrion | 73.6 | 53.5 |
| KRH19100 | Soybean | nucleus | 42.86 | 34.59 |
| VIT_11s0103g00760.t01 | Wine grape | plastid | 43.79 | 33.81 |
| KRH02778 | Soybean | nucleus, plastid | 41.61 | 33.67 |
| PGSC0003DMT400059170 | Potato | plastid | 41.93 | 31.25 |
| Zm00001d015268_P001 | Maize | plastid | 45.65 | 31.14 |
| Solyc07g008540.2.1 | Tomato | nucleus, plastid | 41.3 | 30.79 |
| EES04516 | Sorghum | plastid | 46.27 | 30.66 |
| TraesCS6A01G118000.1 | Wheat | plastid | 45.65 | 29.88 |
| Os02t0148000-01 | Rice | plastid | 43.48 | 29.72 |
| HORVU6Hr1G021460.2 | Barley | plastid | 45.03 | 29.59 |
| TraesCS6D01G108000.1 | Wheat | plastid | 45.34 | 29.55 |
| TraesCS6B01G146200.2 | Wheat | plastid | 45.34 | 29.55 |
| CDY38274 | Canola | nucleus, plastid | 35.71 | 28.97 |
| Zm00001d053880_P001 | Maize | plastid | 42.55 | 28.96 |
| TraesCS7A01G422200.1 | Wheat | nucleus, plastid | 40.99 | 28.82 |
| Bra002752.1-P | Field mustard | nucleus, plastid | 35.09 | 28.75 |
| Bra019134.1-P | Field mustard | plastid | 34.16 | 28.72 |
| TraesCS7D01G414400.2 | Wheat | plastid | 40.68 | 28.67 |
| TraesCS7B01G322600.1 | Wheat | plastid | 40.68 | 28.67 |
| CDY52734 | Canola | nucleus, plastid | 35.4 | 28.64 |
| Bra013939.1-P | Field mustard | plastid | 33.85 | 28.53 |
| CDX89377 | Canola | plastid | 33.85 | 28.53 |
| CDY47926 | Canola | nucleus | 34.47 | 28.32 |
| CDY42238 | Canola | nucleus | 33.85 | 28.24 |
| Bra020461.1-P | Field mustard | nucleus | 34.47 | 28.17 |
| CDX94392 | Canola | plastid | 32.92 | 27.6 |
| Os06t0699600-01 | Rice | plastid | 39.13 | 27.04 |
| CDX92740 | Canola | plastid | 33.23 | 26.95 |
| Zm00001d014664_P001 | Maize | plastid | 35.71 | 26.44 |
| AT5G57180.2 | Thale cress | nucleus, plastid | 35.4 | 26.21 |
| KXG20763 | Sorghum | plastid | 36.65 | 25.99 |
| AT4G25990.2 | Thale cress | nucleus | 32.61 | 25.67 |
| KRH37334 | Soybean | nucleus, plastid | 27.64 | 23.8 |
| HORVU7Hr1G097630.2 | Barley | cytosol, nucleus | 21.12 | 23.05 |
| KRH12328 | Soybean | plastid | 28.26 | 23.04 |
| CDY42769 | Canola | nucleus | 12.42 | 17.17 |
| GSMUA_Achr4P30670_001 | Banana | nucleus | 14.6 | 12.81 |
| GSMUA_Achr10P... | Banana | nucleus | 13.66 | 11.52 |
| GSMUA_Achr7P18710_001 | Banana | plastid | 13.35 | 11.35 |
| GSMUA_Achr10P... | Banana | nucleus | 11.8 | 10.83 |
| GSMUA_Achr10P... | Banana | nucleus | 9.01 | 10.07 |
| GSMUA_Achr7P12560_001 | Banana | nucleus | 9.32 | 9.01 |
| GSMUA_Achr11P... | Banana | nucleus | 4.97 | 8.47 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P30950_001 | EnsemblPlants:GSMUA_Achr10T30950_001 | EnsemblPlantsGene:GSMUA_Achr10G30950_001 | PANTHER:PTHR31874 | PANTHER:PTHR31874:SF10 | SEG:seg |
| UniParc:UPI0002954832 | UniProt:M0RMW9 | MapMan:35.1 | : | : | : |
Description
Putative Protein CHLOROPLAST IMPORT APPARATUS 2 [Source:GMGC_GENE;Acc:GSMUA_Achr10G30950_001]
Coordinates
chr10:+:33150483..33152381
Molecular Weight (calculated)
34977.0 Da
IEP (calculated)
7.149
GRAVY (calculated)
-0.628
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MSACLSGGGG GRTYGFDLDI VKPSSSSSGR SLHSSSPSST LSESSNLPLA ISIKKARTPR KRPNQAYNEA AALLSTIYPS VFSAMELKKL SKNTRPFDSF
101: PEFSELLPPF PVLGDAAVLI HKPQSEKPAA IRLELKHKNP VEECTSQMSS VSQKPNSPDP LHDYFDAESI LDEEVEEGID SIMGNLSMNT PTEDSNNEVS
201: SDRNSPLGLR NGSILRRASR DQDEGDWWRF PAVPVQDIFP NLKPAATIPA LEKKKKKMKK KKNTAGTISN LSQEESKAGL GLKLNHEEVI KAWSDRSSIF
301: SDHPESPDSS TAAPVGIRSP SS
101: PEFSELLPPF PVLGDAAVLI HKPQSEKPAA IRLELKHKNP VEECTSQMSS VSQKPNSPDP LHDYFDAESI LDEEVEEGID SIMGNLSMNT PTEDSNNEVS
201: SDRNSPLGLR NGSILRRASR DQDEGDWWRF PAVPVQDIFP NLKPAATIPA LEKKKKKMKK KKNTAGTISN LSQEESKAGL GLKLNHEEVI KAWSDRSSIF
301: SDHPESPDSS TAAPVGIRSP SS
001: MSACLSSGGG GAAAYSFELE KVKSPPPSSS TTTTRATSPS STISESSNSP LAISTRKPRT QRKRPNQTYN EAATLLSTAY PNIFSSNLSS KQKTHSSSNS
101: HFYGPLLSDN DDASDLLLPY ESIEEPDFLF HPTIQTKTEF FSDQKEVNSG GDCYGGEIEK FDFSDEFDAE SILDEDIEEG IDSIMGTVVE SNSNSGIYES
201: RVPGMINRGG RSSSNRIGKL EQMMMINSWN RSSNGFNFPL GLGLRSALRE NDDTKLWKIH TVDFEQISPR IQTVKTETAI STVDEEKSDG KKVVISGEKS
301: NKKKKKKKMT VTTTLITESK SLEDTEETSL KRTGPLLKLD YDGVLEAWSD KTSPFPDEIQ GSEAVDVNVC LTLISS
101: HFYGPLLSDN DDASDLLLPY ESIEEPDFLF HPTIQTKTEF FSDQKEVNSG GDCYGGEIEK FDFSDEFDAE SILDEDIEEG IDSIMGTVVE SNSNSGIYES
201: RVPGMINRGG RSSSNRIGKL EQMMMINSWN RSSNGFNFPL GLGLRSALRE NDDTKLWKIH TVDFEQISPR IQTVKTETAI STVDEEKSDG KKVVISGEKS
301: NKKKKKKKMT VTTTLITESK SLEDTEETSL KRTGPLLKLD YDGVLEAWSD KTSPFPDEIQ GSEAVDVNVC LTLISS
Arabidopsis Description
CIA2CIA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UDY1]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.