Factsheet for Bra002752.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 6
nucleus 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38274	Canola	nucleus, plastid	95.67	94.71
Bra020461.1-P	Field mustard	nucleus	71.25	71.07
AT5G57180.2	Thale cress	nucleus, plastid	72.26	65.29
Bra013939.1-P	Field mustard	plastid	55.47	57.07
Bra019134.1-P	Field mustard	plastid	53.44	54.83
VIT_11s0103g00760.t01	Wine grape	plastid	48.35	45.56
KRH02778	Soybean	nucleus, plastid	45.55	44.97
KRH19100	Soybean	nucleus	44.53	43.86
PGSC0003DMT400059170	Potato	plastid	46.06	41.9
Solyc07g008540.2.1	Tomato	nucleus, plastid	45.55	41.44
GSMUA_Achr6P01780_001	Banana	nucleus	40.2	38.54
GSMUA_Achr7P19660_001	Banana	mitochondrion	39.69	35.21
GSMUA_Achr10P...	Banana	nucleus	28.75	35.09
KRH37334	Soybean	nucleus, plastid	32.82	34.49
KRH12328	Soybean	plastid	31.3	31.14
EES04516	Sorghum	plastid	37.4	30.25
Bra023461.1-P	Field mustard	cytosol	11.7	30.07
Os02t0148000-01	Rice	plastid	35.62	29.72
Zm00001d053880_P001	Maize	plastid	35.37	29.39
HORVU6Hr1G021460.2	Barley	plastid	36.13	28.98
TraesCS6A01G118000.1	Wheat	plastid	35.88	28.66
TraesCS6D01G108000.1	Wheat	plastid	35.88	28.54
TraesCS6B01G146200.2	Wheat	plastid	35.88	28.54
Zm00001d015268_P001	Maize	plastid	33.08	27.54
Os06t0699600-01	Rice	plastid	32.06	27.04
TraesCS7D01G414400.2	Wheat	plastid	30.28	26.04
TraesCS7A01G422200.1	Wheat	nucleus, plastid	30.03	25.76
Bra015548.1-P	Field mustard	nucleus	13.23	25.62
HORVU7Hr1G097630.2	Barley	cytosol, nucleus	19.08	25.42
TraesCS7B01G322600.1	Wheat	plastid	29.52	25.38
Zm00001d014664_P001	Maize	plastid	27.48	24.83
KXG20763	Sorghum	plastid	28.5	24.67
Bra012475.1-P	Field mustard	nucleus	19.59	18.87
Bra024750.1-P	Field mustard	nucleus	18.83	17.87
Bra006252.1-P	Field mustard	nucleus	13.23	17.28
Bra033925.1-P	Field mustard	nucleus	17.56	17.21
Bra032273.1-P	Field mustard	nucleus	13.74	17.2
Bra004035.1-P	Field mustard	nucleus	18.58	15.4
Bra010994.1-P	Field mustard	nucleus	15.78	15.23
Bra008763.1-P	Field mustard	nucleus, plastid	16.03	11.78
Bra023462.1-P	Field mustard	nucleus	3.31	8.18

Protein Annotations

EnsemblPlants:Bra002752.1	EnsemblPlants:Bra002752.1-P	EnsemblPlantsGene:Bra002752	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:CCT_domain	InterPro:IPR010402
PANTHER:PTHR31874	PANTHER:PTHR31874:SF10	PFAM:PF06203	PFscan:PS51017	SEG:seg	UniParc:UPI0002544DCB
UniProt:M4CEX0	MapMan:15.5.1.2	:	:	:	:

Description

AT4G25990 (E=2e-043) CIL | CIL

Coordinates

chrA10:+:7861017..7863103

Molecular Weight (calculated)

43932.9 Da

IEP (calculated)

9.343

GRAVY (calculated)

-0.717

Length

393 amino acids

Sequence
(BLAST)

001: MSACLSSGGG GAAAYSFELE KKKSSPPPPP SSSTTTRATS PSSTISESSN SPLAISTRKP RRPRKRPNQT YNEAAALLST AYPNLFPSSS NNLYSKKKTH
101: PNPHLYGFAA KSPLLSDNDD ASELLLESIE EPDFLFLPTI QARSEYFSEQ KEVNVNLFEF SDEFDAESIL DEETEEGIDS IMGIVESNSG ENRGHLISRL
201: EHMMKMNRKG FKFPLGLGLR SALREHNDAS WCRFHTVDFE QISPRIQSTV KEEKIESKKS KKKKKKKVPA AAAAVKTVQM TETCRDDSEE KSGQLMLKLD
301: YDGVLEAWSE KELPFSDEIL GSEAAGADVN ARLAQIDLFG DSGIREASVL RYKEKRRTRL FSKKIRYQVR KLNADQRPRM KVSTSTLIRG KNM

Best Arabidopsis Sequence Match ( AT5G57180.1 )
(BLAST)

001: MSACLSSGGG GAAAYSFELE KVKSPPPSSS TTTTRATSPS STISESSNSP LAISTRKPRT QRKRPNQTYN EAATLLSTAY PNIFSSNLSS KQKTHSSSNS
101: HFYGPLLSDN DDASDLLLPY ESIEEPDFLF HPTIQTKTEF FSDQKEVNSG GDCYGGEIEK FDFSDEFDAE SILDEDIEEG IDSIMGTVVE SNSNSGIYES
201: RVPGMINRGG RSSSNRIGKL EQMMMINSWN RSSNGFNFPL GLGLRSALRE NDDTKLWKIH TVDFEQISPR IQTVKTETAI STVDEEKSDG KKVVISGEKS
301: NKKKKKKKMT VTTTLITESK SLEDTEETSL KRTGPLLKLD YDGVLEAWSD KTSPFPDEIQ GSEAVDVNAR LAQIDLFGDS GMREASVLRY KEKRRTRLFS
401: KKIRYQVRKL NADQRPRMKV SNPS

Arabidopsis Description

CIA2CIA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UDY1]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.