Factsheet for Zm00001d015268_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04516	Sorghum	plastid	91.95	89.3
Zm00001d053880_P001	Maize	plastid	80.51	80.34
TraesCS6A01G118000.1	Wheat	plastid	80.51	77.24
HORVU6Hr1G021460.2	Barley	plastid	80.08	77.14
TraesCS6D01G108000.1	Wheat	plastid	80.51	76.92
TraesCS6B01G146200.2	Wheat	plastid	80.3	76.72
Zm00001d014664_P001	Maize	plastid	46.19	50.11
GSMUA_Achr6P01780_001	Banana	nucleus	42.16	48.54
GSMUA_Achr7P19660_001	Banana	mitochondrion	44.28	47.18
GSMUA_Achr10P...	Banana	nucleus	31.14	45.65
KRH02778	Soybean	nucleus, plastid	33.26	39.45
KRH19100	Soybean	nucleus	33.26	39.35
VIT_11s0103g00760.t01	Wine grape	plastid	33.47	37.89
PGSC0003DMT400059170	Potato	plastid	34.11	37.27
Solyc07g008540.2.1	Tomato	nucleus, plastid	33.9	37.04
Bra019134.1-P	Field mustard	plastid	29.24	36.03
CDX89377	Canola	plastid	27.97	34.55
Bra013939.1-P	Field mustard	plastid	27.97	34.55
CDY38274	Canola	nucleus, plastid	28.81	34.26
CDX92740	Canola	plastid	28.81	34.26
CDX94392	Canola	plastid	27.75	34.11
CDY52734	Canola	nucleus, plastid	28.6	33.92
Bra020461.1-P	Field mustard	nucleus	28.18	33.76
AT4G25990.2	Thale cress	nucleus	29.03	33.5
CDY42769	Canola	nucleus	16.53	33.48
CDY47926	Canola	nucleus	27.75	33.42
CDY42238	Canola	nucleus	27.12	33.16
Bra002752.1-P	Field mustard	nucleus, plastid	27.54	33.08
AT5G57180.2	Thale cress	nucleus, plastid	30.3	32.87
KRH37334	Soybean	nucleus, plastid	22.25	28.07
KRH12328	Soybean	plastid	22.88	27.34
Zm00001d049651_P001	Maize	mitochondrion, nucleus, peroxisome, plastid	12.71	22.14
Zm00001d035134_P001	Maize	plastid	10.38	18.35
Zm00001d037327_P001	Maize	mitochondrion, nucleus	17.37	18.14
Zm00001d045661_P001	Maize	nucleus	16.74	17.32
Zm00001d013443_P001	Maize	plastid	15.04	17.19
Zm00001d017939_P001	Maize	nucleus	15.89	16.13
Zm00001d033719_P001	Maize	plastid	15.25	15.29

Protein Annotations

EnsemblPlants:Zm00001d015268_P001	EnsemblPlants:Zm00001d015268_T001	EnsemblPlantsGene:Zm00001d015268	EntrezGene:103626617	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:CCT_domain
InterPro:IPR010402	PANTHER:PTHR31874	PANTHER:PTHR31874:SF7	PFAM:PF06203	PFscan:PS51017	ProteinID:AQK68522.1
SEG:seg	UniParc:UPI0004DE7E88	UniProt:A0A1D6H0V3	MapMan:35.2	:	:

Description

Protein CHLOROPLAST IMPORT APPARATUS 2

Coordinates

chr5:+:82139629..82142593

Molecular Weight (calculated)

49626.4 Da

IEP (calculated)

7.056

GRAVY (calculated)

-0.429

Length

472 amino acids

Sequence
(BLAST)

001: MSSSCMPTGL RLDLDMVKAA ASPGAHSSPL RPVHSSPSST LSEASNASSS ATSVSLKRAR APRKRPNQAY NEAAALLASI HPSVFPVKKS PKTAPPRPPS
101: SRQLSGLAAA LDASSSDLLP PLPVLADSAF LLRDIPAPSP LPQPQSPSAA KNCSSPAPVS SAFRDFRDPA PSPASPDTVD VNELGEIDFD DDGFDAESIL
201: DVEEAAAAAE GLDGIMGSLT VESNSTAATT SDDSILSSSG IHPYLRSLMV VGLAGRFELG LGSRHGARPN LNRALKRRDD DGAWWMWPAV PVKDLTVAPP
301: TPPASNAAVS QPQPAAAPEK NKSKKKKVVK VEKVMMGAKG KEELLPSAKC KEEEADGDGD AESAPVKAPK TGLGLKLDAD EVLKAWSDRG SMFAEGSAPE
401: SPTSVAEARA KLSDMDLFPE NEAGAGAGGV REASVLRYKE KRRTRLFSKK IRYQGRFVRS PSLLRQALEE ES

Best Arabidopsis Sequence Match ( AT5G57180.2 )
(BLAST)

001: MSACLSSGGG GAAAYSFELE KVKSPPPSSS TTTTRATSPS STISESSNSP LAISTRKPRT QRKRPNQTYN EAATLLSTAY PNIFSSNLSS KQKTHSSSNS
101: HFYGPLLSDN DDASDLLLPY ESIEEPDFLF HPTIQTKTEF FSDQKEVNSG GDCYGGEIEK FDFSDEFDAE SILDEDIEEG IDSIMGTVVE SNSNSGIYES
201: RVPGMINRGG RSSSNRIGKL EQMMMINSWN RSSNGFNFPL GLGLRSALRE NDDTKLWKIH TVDFEQISPR IQTVKTETAI STVDEEKSDG KKVVISGEKS
301: NKKKKKKKMT VTTTLITESK SLEDTEETSL KRTGPLLKLD YDGVLEAWSD KTSPFPDEIQ GSEAVDVNAR LAQIDLFGDS GMREASVLRY KEKRRTRLFS
401: KKIRYQVRKL NADQRPRMKG RFVRRPNEST PSGQR

Arabidopsis Description

CIA2CIA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UDY1]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.