Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52734 | Canola | nucleus, plastid | 68.28 | 74.62 |
| CDY38274 | Canola | nucleus, plastid | 68.05 | 74.56 |
| Bra002752.1-P | Field mustard | nucleus, plastid | 65.29 | 72.26 |
| CDY42238 | Canola | nucleus | 63.45 | 71.5 |
| CDY47926 | Canola | nucleus | 63.45 | 70.41 |
| Bra020461.1-P | Field mustard | nucleus | 63.68 | 70.3 |
| AT4G25990.2 | Thale cress | nucleus | 54.25 | 57.7 |
| VIT_11s0103g00760.t01 | Wine grape | plastid | 46.21 | 48.2 |
| KRH02778 | Soybean | nucleus, plastid | 43.22 | 47.24 |
| KRH19100 | Soybean | nucleus | 41.84 | 45.61 |
| PGSC0003DMT400059170 | Potato | plastid | 44.37 | 44.68 |
| Solyc07g008540.2.1 | Tomato | nucleus, plastid | 43.68 | 43.98 |
| GSMUA_Achr6P01780_001 | Banana | nucleus | 38.16 | 40.49 |
| GSMUA_Achr7P19660_001 | Banana | mitochondrion | 37.7 | 37.02 |
| GSMUA_Achr10P... | Banana | nucleus | 26.21 | 35.4 |
| KRH37334 | Soybean | nucleus, plastid | 29.66 | 34.49 |
| EES04516 | Sorghum | plastid | 36.09 | 32.3 |
| KRH12328 | Soybean | plastid | 28.97 | 31.9 |
| Os02t0148000-01 | Rice | plastid | 33.56 | 31.0 |
| TraesCS6A01G118000.1 | Wheat | plastid | 34.94 | 30.89 |
| HORVU6Hr1G021460.2 | Barley | plastid | 34.71 | 30.82 |
| TraesCS6B01G146200.2 | Wheat | plastid | 34.94 | 30.77 |
| TraesCS6D01G108000.1 | Wheat | plastid | 34.94 | 30.77 |
| Zm00001d015268_P001 | Maize | plastid | 32.87 | 30.3 |
| Zm00001d053880_P001 | Maize | plastid | 32.87 | 30.23 |
| HORVU7Hr1G097630.2 | Barley | cytosol, nucleus | 19.54 | 28.81 |
| Os06t0699600-01 | Rice | plastid | 30.11 | 28.11 |
| TraesCS7D01G414400.2 | Wheat | plastid | 29.43 | 28.01 |
| TraesCS7A01G422200.1 | Wheat | nucleus, plastid | 29.43 | 27.95 |
| TraesCS7B01G322600.1 | Wheat | plastid | 28.97 | 27.57 |
| AT1G07050.2 | Thale cress | nucleus | 12.41 | 27.27 |
| Zm00001d014664_P001 | Maize | plastid | 26.44 | 26.44 |
| KXG20763 | Sorghum | plastid | 27.59 | 26.43 |
| AT5G14370.1 | Thale cress | nucleus | 15.86 | 20.35 |
| AT1G68520.1 | Thale cress | nucleus | 18.39 | 19.7 |
| AT1G25440.1 | Thale cress | nucleus | 18.39 | 19.18 |
| AT1G73870.1 | Thale cress | nucleus | 16.55 | 18.37 |
| AT1G49130.1 | Thale cress | nucleus | 13.33 | 17.79 |
Protein Annotations
| MapMan:15.5.1.2 | EntrezGene:835824 | UniProt:A0A178UDY1 | ProteinID:AED96860.1 | EMBL:AF359387 | EMBL:AF372929 |
| EMBL:AK221521 | EMBL:AK316813 | ArrayExpress:AT5G57180 | EnsemblPlantsGene:AT5G57180 | RefSeq:AT5G57180 | TAIR:AT5G57180 |
| RefSeq:AT5G57180-TAIR-G | EnsemblPlants:AT5G57180.2 | TAIR:AT5G57180.2 | EMBL:AY078036 | ProteinID:BAA97368.1 | InterPro:CCT_domain |
| Symbol:CIA2 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 |
| GO:GO:0045036 | InterPro:IPR010402 | RefSeq:NP_001032087.1 | RefSeq:NP_001332283.1 | RefSeq:NP_568852.2 | RefSeq:NP_851201.1 |
| ProteinID:OAO91352.1 | PFAM:PF06203 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020137 | PO:PO:0025022 | PFscan:PS51017 | PANTHER:PTHR31874 |
| PANTHER:PTHR31874:SF10 | UniProt:Q9LU68 | UniParc:UPI00000A3814 | SEG:seg | : | : |
Description
CIA2CIA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UDY1]
Coordinates
chr5:+:23167774..23171025
Molecular Weight (calculated)
48412.5 Da
IEP (calculated)
7.560
GRAVY (calculated)
-0.787
Length
435 amino acids
Sequence
(BLAST)
(BLAST)
001: MSACLSSGGG GAAAYSFELE KVKSPPPSSS TTTTRATSPS STISESSNSP LAISTRKPRT QRKRPNQTYN EAATLLSTAY PNIFSSNLSS KQKTHSSSNS
101: HFYGPLLSDN DDASDLLLPY ESIEEPDFLF HPTIQTKTEF FSDQKEVNSG GDCYGGEIEK FDFSDEFDAE SILDEDIEEG IDSIMGTVVE SNSNSGIYES
201: RVPGMINRGG RSSSNRIGKL EQMMMINSWN RSSNGFNFPL GLGLRSALRE NDDTKLWKIH TVDFEQISPR IQTVKTETAI STVDEEKSDG KKVVISGEKS
301: NKKKKKKKMT VTTTLITESK SLEDTEETSL KRTGPLLKLD YDGVLEAWSD KTSPFPDEIQ GSEAVDVNAR LAQIDLFGDS GMREASVLRY KEKRRTRLFS
401: KKIRYQVRKL NADQRPRMKG RFVRRPNEST PSGQR
101: HFYGPLLSDN DDASDLLLPY ESIEEPDFLF HPTIQTKTEF FSDQKEVNSG GDCYGGEIEK FDFSDEFDAE SILDEDIEEG IDSIMGTVVE SNSNSGIYES
201: RVPGMINRGG RSSSNRIGKL EQMMMINSWN RSSNGFNFPL GLGLRSALRE NDDTKLWKIH TVDFEQISPR IQTVKTETAI STVDEEKSDG KKVVISGEKS
301: NKKKKKKKMT VTTTLITESK SLEDTEETSL KRTGPLLKLD YDGVLEAWSD KTSPFPDEIQ GSEAVDVNAR LAQIDLFGDS GMREASVLRY KEKRRTRLFS
401: KKIRYQVRKL NADQRPRMKG RFVRRPNEST PSGQR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.