Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020461.1-P | Field mustard | nucleus | 94.3 | 92.39 |
| CDY47926 | Canola | nucleus | 93.78 | 92.35 |
| CDY38274 | Canola | nucleus, plastid | 76.17 | 74.06 |
| CDY52734 | Canola | nucleus, plastid | 75.91 | 73.62 |
| AT5G57180.2 | Thale cress | nucleus, plastid | 71.5 | 63.45 |
| CDX89377 | Canola | plastid | 53.37 | 53.93 |
| CDX94392 | Canola | plastid | 51.81 | 52.08 |
| CDX92740 | Canola | plastid | 53.37 | 51.89 |
| CDY42769 | Canola | nucleus | 30.31 | 50.21 |
| KRH02778 | Soybean | nucleus, plastid | 46.37 | 44.97 |
| VIT_11s0103g00760.t01 | Wine grape | plastid | 48.45 | 44.84 |
| KRH19100 | Soybean | nucleus | 45.6 | 44.11 |
| PGSC0003DMT400059170 | Potato | plastid | 46.89 | 41.9 |
| Solyc07g008540.2.1 | Tomato | nucleus, plastid | 45.08 | 40.28 |
| GSMUA_Achr6P01780_001 | Banana | nucleus | 38.6 | 36.34 |
| GSMUA_Achr7P19660_001 | Banana | mitochondrion | 39.9 | 34.76 |
| GSMUA_Achr10P... | Banana | nucleus | 28.24 | 33.85 |
| CDX70561 | Canola | nucleus | 13.21 | 33.77 |
| KRH37334 | Soybean | nucleus, plastid | 32.38 | 33.42 |
| CDX77359 | Canola | nucleus | 12.95 | 31.25 |
| KRH12328 | Soybean | plastid | 31.61 | 30.89 |
| EES04516 | Sorghum | plastid | 36.79 | 29.22 |
| CDY15597 | Canola | nucleus | 14.77 | 29.08 |
| Zm00001d053880_P001 | Maize | plastid | 34.97 | 28.54 |
| CDY66177 | Canola | nucleus | 14.51 | 28.43 |
| HORVU6Hr1G021460.2 | Barley | plastid | 35.75 | 28.16 |
| TraesCS6A01G118000.1 | Wheat | plastid | 35.49 | 27.85 |
| Os02t0148000-01 | Rice | plastid | 33.94 | 27.81 |
| TraesCS6B01G146200.2 | Wheat | plastid | 35.49 | 27.73 |
| TraesCS6D01G108000.1 | Wheat | plastid | 35.49 | 27.73 |
| CDY06672 | Canola | nucleus | 14.51 | 27.72 |
| Zm00001d015268_P001 | Maize | plastid | 33.16 | 27.12 |
| HORVU7Hr1G097630.2 | Barley | cytosol, nucleus | 20.73 | 27.12 |
| Os06t0699600-01 | Rice | plastid | 32.64 | 27.04 |
| CDY10244 | Canola | nucleus | 13.99 | 26.73 |
| TraesCS7D01G414400.2 | Wheat | plastid | 30.57 | 25.82 |
| TraesCS7A01G422200.1 | Wheat | nucleus, plastid | 30.31 | 25.55 |
| TraesCS7B01G322600.1 | Wheat | plastid | 30.05 | 25.38 |
| Zm00001d014664_P001 | Maize | plastid | 28.24 | 25.06 |
| KXG20763 | Sorghum | plastid | 29.27 | 24.89 |
| CDY07383 | Canola | cytosol | 14.77 | 24.78 |
| CDY04230 | Canola | nucleus | 13.99 | 23.48 |
| CDX85600 | Canola | nucleus | 17.88 | 21.7 |
| CDX69586 | Canola | nucleus, plastid | 18.39 | 21.52 |
| CDX91067 | Canola | nucleus | 17.88 | 21.36 |
| CDX78575 | Canola | nucleus | 16.32 | 20.93 |
| CDY09849 | Canola | nucleus | 17.88 | 20.85 |
| CDY03851 | Canola | nucleus | 19.43 | 20.16 |
| CDY65591 | Canola | nucleus | 17.88 | 19.83 |
| CDY53119 | Canola | nucleus | 19.17 | 19.68 |
| CDY67920 | Canola | nucleus | 17.62 | 19.54 |
| CDY24402 | Canola | nucleus | 18.65 | 19.51 |
| CDY51133 | Canola | nucleus | 18.65 | 19.1 |
| CDY66242 | Canola | nucleus | 15.03 | 18.47 |
| CDX81527 | Canola | nucleus | 18.65 | 17.96 |
| CDY44890 | Canola | nucleus | 18.65 | 17.96 |
| CDY36106 | Canola | nucleus | 15.8 | 15.89 |
| CDY04231 | Canola | mitochondrion | 0.78 | 6.82 |
| CDY07382 | Canola | nucleus | 0.78 | 6.82 |
Protein Annotations
| EnsemblPlants:CDY42238 | EnsemblPlantsGene:GSBRNA2T00074459001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:CCT_domain | InterPro:IPR010402 | PANTHER:PTHR31874 |
| PANTHER:PTHR31874:SF10 | PFAM:PF06203 | PFscan:PS51017 | ProteinID:CDY42238 | ProteinID:CDY42238.1 | SEG:seg |
| UniParc:UPI0004EE887F | UniProt:A0A078HZN4 | MapMan:15.5.1.2 | : | : | : |
Description
BnaC02g11770DBnaC02g11770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZN4]
Coordinates
chrLK032519:+:58089..60773
Molecular Weight (calculated)
43177.7 Da
IEP (calculated)
9.518
GRAVY (calculated)
-0.731
Length
386 amino acids
Sequence
(BLAST)
(BLAST)
001: MSACLSSGGS AAAYSFELEK LKSPPSSSTT TTTRAASPSS TITESTNSPL AISTRKPRTQ RKRPNQSYNE AAALLSTAYP NIFSPSSINH LYAHKKTHQN
101: PHFYGFDEDE AELLLLSESI EEPDFLFLPA IQARYSDQKE VNSGVSINES EVSQFEFSDE FDAGSILGEE VEEGIDSIMG KLEPGIKRGR RINRLSQIMT
201: MNRGFKFAEN IPLGLGLRSA LRDHNDANRW RIHTVDFDQI SPRIQTVDDV KTEVKKSKKK KKKVAAAAST ESSKEETEER SGHPMLKLDY DGVLEAWSDK
301: ATPFPDEILG SEATGADVNA RLAQIDLFGD NGVREASVLR YKEKRQTRLF SKKIRYQVRK LNADQRPRVK GRFVRRPSAS PPRCQR
101: PHFYGFDEDE AELLLLSESI EEPDFLFLPA IQARYSDQKE VNSGVSINES EVSQFEFSDE FDAGSILGEE VEEGIDSIMG KLEPGIKRGR RINRLSQIMT
201: MNRGFKFAEN IPLGLGLRSA LRDHNDANRW RIHTVDFDQI SPRIQTVDDV KTEVKKSKKK KKKVAAAAST ESSKEETEER SGHPMLKLDY DGVLEAWSDK
301: ATPFPDEILG SEATGADVNA RLAQIDLFGD NGVREASVLR YKEKRQTRLF SKKIRYQVRK LNADQRPRVK GRFVRRPSAS PPRCQR
001: MSACLSSGGG GAAAYSFELE KVKSPPPSSS TTTTRATSPS STISESSNSP LAISTRKPRT QRKRPNQTYN EAATLLSTAY PNIFSSNLSS KQKTHSSSNS
101: HFYGPLLSDN DDASDLLLPY ESIEEPDFLF HPTIQTKTEF FSDQKEVNSG GDCYGGEIEK FDFSDEFDAE SILDEDIEEG IDSIMGTVVE SNSNSGIYES
201: RVPGMINRGG RSSSNRIGKL EQMMMINSWN RSSNGFNFPL GLGLRSALRE NDDTKLWKIH TVDFEQISPR IQTVKTETAI STVDEEKSDG KKVVISGEKS
301: NKKKKKKKMT VTTTLITESK SLEDTEETSL KRTGPLLKLD YDGVLEAWSD KTSPFPDEIQ GSEAVDVNAR LAQIDLFGDS GMREASVLRY KEKRRTRLFS
401: KKIRYQVRKL NADQRPRMKG RFVRRPNEST PSGQR
101: HFYGPLLSDN DDASDLLLPY ESIEEPDFLF HPTIQTKTEF FSDQKEVNSG GDCYGGEIEK FDFSDEFDAE SILDEDIEEG IDSIMGTVVE SNSNSGIYES
201: RVPGMINRGG RSSSNRIGKL EQMMMINSWN RSSNGFNFPL GLGLRSALRE NDDTKLWKIH TVDFEQISPR IQTVKTETAI STVDEEKSDG KKVVISGEKS
301: NKKKKKKKMT VTTTLITESK SLEDTEETSL KRTGPLLKLD YDGVLEAWSD KTSPFPDEIQ GSEAVDVNAR LAQIDLFGDS GMREASVLRY KEKRRTRLFS
401: KKIRYQVRKL NADQRPRMKG RFVRRPNEST PSGQR
Arabidopsis Description
CIA2CIA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UDY1]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.