Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92740 | Canola | plastid | 85.84 | 50.38 |
| CDX89377 | Canola | plastid | 68.24 | 41.62 |
| CDX94392 | Canola | plastid | 67.38 | 40.89 |
| AT4G25990.2 | Thale cress | nucleus | 64.38 | 36.67 |
| CDY52734 | Canola | nucleus, plastid | 54.94 | 32.16 |
| CDX70561 | Canola | nucleus | 20.6 | 31.79 |
| CDY38274 | Canola | nucleus, plastid | 53.65 | 31.49 |
| CDY42238 | Canola | nucleus | 50.21 | 30.31 |
| CDY47926 | Canola | nucleus | 49.36 | 29.34 |
| CDX77359 | Canola | nucleus | 19.31 | 28.12 |
| CDY66177 | Canola | nucleus | 21.03 | 24.87 |
| CDY06672 | Canola | nucleus | 21.46 | 24.75 |
| CDY15597 | Canola | nucleus | 20.6 | 24.49 |
| VIT_11s0103g00760.t01 | Wine grape | plastid | 42.92 | 23.98 |
| CDY10244 | Canola | nucleus | 20.6 | 23.76 |
| PGSC0003DMT400059170 | Potato | plastid | 41.63 | 22.45 |
| Solyc07g008540.2.1 | Tomato | nucleus, plastid | 41.63 | 22.45 |
| GSMUA_Achr6P01780_001 | Banana | nucleus | 38.63 | 21.95 |
| HORVU7Hr1G097630.2 | Barley | cytosol, nucleus | 27.47 | 21.69 |
| KRH02778 | Soybean | nucleus, plastid | 36.48 | 21.36 |
| KRH19100 | Soybean | nucleus | 35.62 | 20.8 |
| CDY07383 | Canola | cytosol | 19.74 | 20.0 |
| GSMUA_Achr7P19660_001 | Banana | mitochondrion | 36.91 | 19.41 |
| EES04516 | Sorghum | plastid | 39.06 | 18.72 |
| CDY04230 | Canola | nucleus | 18.45 | 18.7 |
| Os02t0148000-01 | Rice | plastid | 36.48 | 18.05 |
| HORVU6Hr1G021460.2 | Barley | plastid | 37.77 | 17.96 |
| TraesCS6A01G118000.1 | Wheat | plastid | 37.34 | 17.68 |
| CDX91067 | Canola | nucleus | 24.46 | 17.65 |
| TraesCS6D01G108000.1 | Wheat | plastid | 37.34 | 17.61 |
| TraesCS6B01G146200.2 | Wheat | plastid | 37.34 | 17.61 |
| CDX85600 | Canola | nucleus | 24.03 | 17.61 |
| CDX78575 | Canola | nucleus | 22.75 | 17.61 |
| Zm00001d053880_P001 | Maize | plastid | 35.62 | 17.55 |
| CDX69586 | Canola | nucleus, plastid | 23.61 | 16.67 |
| CDY09849 | Canola | nucleus | 23.61 | 16.62 |
| KRH37334 | Soybean | nucleus, plastid | 26.61 | 16.58 |
| Zm00001d015268_P001 | Maize | plastid | 33.48 | 16.53 |
| KRH12328 | Soybean | plastid | 26.61 | 15.7 |
| TraesCS7A01G422200.1 | Wheat | nucleus, plastid | 29.61 | 15.07 |
| TraesCS7D01G414400.2 | Wheat | plastid | 29.18 | 14.88 |
| TraesCS7B01G322600.1 | Wheat | plastid | 28.76 | 14.66 |
| CDY66242 | Canola | nucleus | 19.31 | 14.33 |
| CDY24402 | Canola | nucleus | 21.89 | 13.82 |
| Os06t0699600-01 | Rice | plastid | 27.47 | 13.73 |
| CDY65591 | Canola | nucleus | 19.31 | 12.93 |
| CDY03851 | Canola | nucleus | 20.6 | 12.9 |
| CDY67920 | Canola | nucleus | 18.88 | 12.64 |
| CDY53119 | Canola | nucleus | 20.17 | 12.5 |
| CDX81527 | Canola | nucleus | 21.46 | 12.47 |
| CDY44890 | Canola | nucleus | 21.46 | 12.47 |
| CDY51133 | Canola | nucleus | 20.17 | 12.47 |
| GSMUA_Achr10P... | Banana | nucleus | 17.17 | 12.42 |
| Zm00001d014664_P001 | Maize | plastid | 22.32 | 11.95 |
| KXG20763 | Sorghum | plastid | 21.46 | 11.01 |
| CDY36106 | Canola | nucleus | 17.17 | 10.42 |
| CDY04231 | Canola | mitochondrion | 0.43 | 2.27 |
| CDY07382 | Canola | nucleus | 0.43 | 2.27 |
Protein Annotations
| EnsemblPlants:CDY42769 | EnsemblPlantsGene:GSBRNA2T00075323001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:CCT_domain | InterPro:IPR010402 | PANTHER:PTHR31874 |
| PANTHER:PTHR31874:SF10 | PFAM:PF06203 | PFscan:PS51017 | ProteinID:CDY42769 | ProteinID:CDY42769.1 | SEG:seg |
| UniParc:UPI0004EDCFC3 | UniProt:A0A078HZJ8 | MapMan:15.5.1.2 | : | : | : |
Description
BnaA03g47700DBnaA03g47700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZJ8]
Coordinates
chrLK032533:+:234562..235945
Molecular Weight (calculated)
26453.4 Da
IEP (calculated)
10.283
GRAVY (calculated)
-0.793
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MHKRTKWRGS SLWSQNNESN DGECTTMPWY RSSIGFSSPG NFPLGLGLRS SLREEDDDDD GSLCRYPTVE LKHISPRIQT TTTAAALTDD VAVDSIKSKK
101: KKTKKKKKVA AAAAESRSVE DLTTEKRVST FLKLDYDRVL EAWSDKESPF SDEILGSHAT GIDIHTMLAE IDLFGESGMR EASVLRYKEK RMNRLFSNSK
201: QIRYQVRKLS ADQRPRMKGR FVRRPNVRSL SGL
101: KKTKKKKKVA AAAAESRSVE DLTTEKRVST FLKLDYDRVL EAWSDKESPF SDEILGSHAT GIDIHTMLAE IDLFGESGMR EASVLRYKEK RMNRLFSNSK
201: QIRYQVRKLS ADQRPRMKGR FVRRPNVRSL SGL
001: MSSCAYSFEL EMMKSPPSNN TPSPSSTISE TNSPPFSIST RRPRTPRKRP NQTYDEAAAL LSTAYPKIFS SKKAKTQIFG TNKSPLSDYD EASQLLLPYV
101: SIEENEFLFN PTIPTKTEHF LEQKEVSFDD LEVNGFGVLD DFDAESILDE EIEEGIDSFM GNIESNDGDR ENCYRVGRLE EIMKNAWNGR FRLGLGLRSS
201: LRQNNDENWW KFPTVEFDQI SPRIQTTAAA AADDGQSNVV DSSKIKTIVT AEGDKKKKKK KKKKKVAPAA AESKSSEVTD SNPKLEQRVS PLLKLDYDGV
301: LEAWSGKESP FSDEILGSDA DGVDFHVRLG EIDLFGESGM REASVLRYKE KRRNRLFSKK IRYQVRKLNA DQRPRMKGRF VRRPNARNLS GLRL
101: SIEENEFLFN PTIPTKTEHF LEQKEVSFDD LEVNGFGVLD DFDAESILDE EIEEGIDSFM GNIESNDGDR ENCYRVGRLE EIMKNAWNGR FRLGLGLRSS
201: LRQNNDENWW KFPTVEFDQI SPRIQTTAAA AADDGQSNVV DSSKIKTIVT AEGDKKKKKK KKKKKVAPAA AESKSSEVTD SNPKLEQRVS PLLKLDYDGV
301: LEAWSGKESP FSDEILGSDA DGVDFHVRLG EIDLFGESGM REASVLRYKE KRRNRLFSKK IRYQVRKLNA DQRPRMKGRF VRRPNARNLS GLRL
Arabidopsis Description
CILCCT motif family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVJ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.