Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51133 | Canola | nucleus | 91.67 | 90.45 |
| CDY53119 | Canola | nucleus | 89.78 | 88.83 |
| CDY07382 | Canola | nucleus | 9.95 | 84.09 |
| CDY67920 | Canola | nucleus | 76.34 | 81.61 |
| CDY65591 | Canola | nucleus | 75.54 | 80.75 |
| CDY04231 | Canola | mitochondrion | 9.41 | 79.55 |
| CDX77359 | Canola | nucleus | 32.53 | 75.62 |
| AT1G25440.1 | Thale cress | nucleus | 84.14 | 75.06 |
| CDY07383 | Canola | cytosol | 35.22 | 56.96 |
| KRH13468 | Soybean | cytosol | 15.05 | 56.57 |
| CDY04230 | Canola | nucleus | 34.41 | 55.65 |
| CDX81527 | Canola | nucleus | 59.68 | 55.36 |
| CDY44890 | Canola | nucleus | 59.41 | 55.11 |
| CDY24402 | Canola | nucleus | 50.81 | 51.22 |
| VIT_01s0011g03520.t01 | Wine grape | nucleus | 50.27 | 43.29 |
| CDY36106 | Canola | nucleus | 44.62 | 43.23 |
| KRH35955 | Soybean | nucleus | 48.66 | 43.2 |
| GSMUA_Achr4P30670_001 | Banana | nucleus | 41.94 | 42.51 |
| GSMUA_Achr10P... | Banana | nucleus | 43.55 | 42.41 |
| KRG90815 | Soybean | nucleus | 46.77 | 41.63 |
| GSMUA_Achr10P... | Banana | nucleus | 39.25 | 41.6 |
| Solyc05g009310.2.1 | Tomato | nucleus | 48.39 | 41.19 |
| GSMUA_Achr7P18710_001 | Banana | plastid | 41.94 | 41.16 |
| Solyc04g007210.2.1 | Tomato | nucleus | 47.31 | 41.12 |
| PGSC0003DMT400037755 | Potato | nucleus | 48.39 | 40.27 |
| GSMUA_Achr7P12560_001 | Banana | nucleus | 36.02 | 40.24 |
| Zm00001d037327_P001 | Maize | mitochondrion, nucleus | 45.7 | 37.61 |
| TraesCS7D01G209000.1 | Wheat | nucleus | 43.55 | 37.5 |
| TraesCS7A01G206200.1 | Wheat | nucleus | 43.28 | 37.27 |
| TraesCS7B01G113400.1 | Wheat | nucleus | 43.01 | 37.04 |
| Zm00001d045661_P001 | Maize | nucleus | 44.89 | 36.62 |
| TraesCS4D01G046200.1 | Wheat | nucleus, plastid | 39.52 | 35.85 |
| HORVU4Hr1G007420.1 | Barley | nucleus, plastid | 39.52 | 35.85 |
| TraesCS4A01G268500.1 | Wheat | nucleus, plastid | 39.52 | 35.85 |
| TraesCS4B01G045700.1 | Wheat | nucleus, plastid | 39.52 | 35.77 |
| EER88191 | Sorghum | nucleus, plastid | 45.43 | 35.65 |
| Os03t0711100-01 | Rice | plastid | 40.05 | 35.39 |
| Zm00001d013443_P001 | Maize | plastid | 38.98 | 35.11 |
| TraesCS6B01G323400.1 | Wheat | nucleus | 40.32 | 35.05 |
| TraesCS6D01G274100.1 | Wheat | nucleus | 40.86 | 35.02 |
| Os02t0731700-02 | Rice | nucleus | 42.47 | 34.96 |
| Os06t0264200-00 | Rice | plastid | 45.16 | 34.93 |
| TraesCS6A01G293200.1 | Wheat | nucleus | 39.78 | 34.74 |
| EER93585 | Sorghum | plastid | 38.44 | 34.05 |
| Zm00001d017939_P001 | Maize | nucleus | 42.2 | 33.76 |
| EES05581 | Sorghum | nucleus, plastid | 42.47 | 32.38 |
| CDX70561 | Canola | nucleus | 12.63 | 31.13 |
| Zm00001d033719_P001 | Maize | plastid | 38.71 | 30.57 |
| HORVU6Hr1G073170.1 | Barley | nucleus | 40.59 | 30.32 |
| CDY66242 | Canola | nucleus | 25.54 | 30.25 |
| CDY15597 | Canola | nucleus | 15.32 | 29.08 |
| PGSC0003DMT400020030 | Potato | nucleus | 43.82 | 28.95 |
| CDY66177 | Canola | nucleus | 15.32 | 28.93 |
| CDY06672 | Canola | nucleus | 14.78 | 27.23 |
| CDY10244 | Canola | nucleus | 14.25 | 26.24 |
| CDX78575 | Canola | nucleus | 17.2 | 21.26 |
| CDX69586 | Canola | nucleus, plastid | 18.82 | 21.21 |
| CDY09849 | Canola | nucleus | 18.82 | 21.15 |
| CDY38274 | Canola | nucleus, plastid | 22.04 | 20.65 |
| CDY42769 | Canola | nucleus | 12.9 | 20.6 |
| CDX85600 | Canola | nucleus | 17.47 | 20.44 |
| CDY52734 | Canola | nucleus, plastid | 21.77 | 20.35 |
| CDX91067 | Canola | nucleus | 17.2 | 19.81 |
| CDY42238 | Canola | nucleus | 20.16 | 19.43 |
| CDY47926 | Canola | nucleus | 20.43 | 19.39 |
| CDX94392 | Canola | plastid | 19.09 | 18.49 |
| CDX89377 | Canola | plastid | 18.82 | 18.32 |
| CDX92740 | Canola | plastid | 18.28 | 17.13 |
Protein Annotations
| MapMan:15.5.1.2 | GO:A0A078ERG6 | InterPro:CCT_domain | EnsemblPlants:CDY03851 | ProteinID:CDY03851 | ProteinID:CDY03851.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0008270 | EnsemblPlantsGene:GSBRNA2T00117316001 | InterPro:IPR000315 | InterPro:IPR010402 | PFAM:PF00643 | PFAM:PF06203 |
| PFscan:PS50119 | PFscan:PS51017 | PANTHER:PTHR31874 | PANTHER:PTHR31874:SF21 | SMART:SM00336 | UniParc:UPI0004EEDF89 |
| InterPro:Znf_B-box | SEG:seg | : | : | : | : |
Description
BnaC07g10760D
Coordinates
chrLK031947:+:81860..83598
Molecular Weight (calculated)
41642.9 Da
IEP (calculated)
6.327
GRAVY (calculated)
-0.659
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSLASAVGA KTARACDSCV KRRARWYCAA DDAFLCQSCD TLVHSANLLA RRHERVLLKS ASKHSNHNHN HSPSSPPHEA ATWHHGFTRK PRTPRGSGKK
101: NNLSIFHALV PEISVEDQTE GCELEEQLIC QVPVLDPTVA EQILNDVVEA KIEFPIMRSG VMMDDQEDED NDESCLNGFF PTGMELEEYA ADVESLLGRG
201: LDTESYAMEE LGFDYESHNT YEEEALKNVE SSGECITVKE EEQKNVLMLR LNYESVISTW GGQGPPWTSG EPPERDVDIS GWPVVSMGGN VRESQQKHHV
301: GGCLPSSGFG DGGREARVSR YREKRRTRLF SKKIRYEVRK LNAEKRPRMK GRFVKRASLA VSAMNSPLGV NY
101: NNLSIFHALV PEISVEDQTE GCELEEQLIC QVPVLDPTVA EQILNDVVEA KIEFPIMRSG VMMDDQEDED NDESCLNGFF PTGMELEEYA ADVESLLGRG
201: LDTESYAMEE LGFDYESHNT YEEEALKNVE SSGECITVKE EEQKNVLMLR LNYESVISTW GGQGPPWTSG EPPERDVDIS GWPVVSMGGN VRESQQKHHV
301: GGCLPSSGFG DGGREARVSR YREKRRTRLF SKKIRYEVRK LNAEKRPRMK GRFVKRASLA VSAMNSPLGV NY
001: MMKSLANAVG AKTARACDSC VKRRARWYCA ADDAFLCQSC DSLVHSANPL ARRHERVRLK TASPAVVKHS NHSSASPPHE VATWHHGFTR KARTPRGSGK
101: KNNSSIFHDL VPDISIEDQT DNYELEEQLI CQVPVLDPLV SEQFLNDVVE PKIEFPMIRS GLMIEEEEDN AESCLNGFFP TDMELEEFAA DVETLLGRGL
201: DTESYAMEEL GLSNSEMFKI EKDEIEEEVE EIKAMSMDIF DDDRKDVDGT VPFELSFDYE SSHKTSEEEV MKNVESSGEC VVKVKEEEHK NVLMLRLNYD
301: SVISTWGGQG PPWSSGEPPE RDMDISGWPA FSMVENGGES THQKQYVGGC LPSSGFGDGG REARVSRYRE KRRTRLFSKK IRYEVRKLNA EKRPRMKGRF
401: VKRASLAAAA SPLGVNY
101: KNNSSIFHDL VPDISIEDQT DNYELEEQLI CQVPVLDPLV SEQFLNDVVE PKIEFPMIRS GLMIEEEEDN AESCLNGFFP TDMELEEFAA DVETLLGRGL
201: DTESYAMEEL GLSNSEMFKI EKDEIEEEVE EIKAMSMDIF DDDRKDVDGT VPFELSFDYE SSHKTSEEEV MKNVESSGEC VVKVKEEEHK NVLMLRLNYD
301: SVISTWGGQG PPWSSGEPPE RDMDISGWPA FSMVENGGES THQKQYVGGC LPSSGFGDGG REARVSRYRE KRRTRLFSKK IRYEVRKLNA EKRPRMKGRF
401: VKRASLAAAA SPLGVNY
Arabidopsis Description
COL16Zinc finger protein CONSTANS-LIKE 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWD0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.