Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 4
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d033719_P001 | Maize | plastid | 84.99 | 74.52 |
| Os03t0711100-01 | Rice | plastid | 73.85 | 72.45 |
| TraesCS4A01G268500.1 | Wheat | nucleus, plastid | 67.31 | 67.8 |
| TraesCS4D01G046200.1 | Wheat | nucleus, plastid | 67.07 | 67.56 |
| TraesCS4B01G045700.1 | Wheat | nucleus, plastid | 66.59 | 66.91 |
| HORVU4Hr1G007420.1 | Barley | nucleus, plastid | 65.62 | 66.1 |
| CDY04231 | Canola | mitochondrion | 5.81 | 54.55 |
| KRH13468 | Soybean | cytosol | 10.65 | 44.44 |
| CDY65591 | Canola | nucleus | 34.14 | 40.52 |
| CDY67920 | Canola | nucleus | 33.9 | 40.23 |
| CDX77359 | Canola | nucleus | 15.5 | 40.0 |
| CDY03851 | Canola | nucleus | 35.11 | 38.98 |
| KRH35955 | Soybean | nucleus | 38.98 | 38.42 |
| VIT_01s0011g03520.t01 | Wine grape | nucleus | 39.71 | 37.96 |
| CDY24402 | Canola | nucleus | 33.66 | 37.67 |
| CDY53119 | Canola | nucleus | 33.9 | 37.23 |
| KRG90815 | Soybean | nucleus | 37.53 | 37.08 |
| Zm00001d037327_P001 | Maize | mitochondrion, nucleus | 40.44 | 36.95 |
| CDY51133 | Canola | nucleus | 33.66 | 36.87 |
| Zm00001d045661_P001 | Maize | nucleus | 39.71 | 35.96 |
| Bra024750.1-P | Field mustard | nucleus | 35.35 | 35.27 |
| Bra012475.1-P | Field mustard | nucleus | 34.62 | 35.05 |
| AT1G25440.1 | Thale cress | nucleus | 35.35 | 35.01 |
| Solyc04g007210.2.1 | Tomato | nucleus | 36.08 | 34.81 |
| Solyc05g009310.2.1 | Tomato | nucleus | 36.32 | 34.32 |
| AT1G68520.1 | Thale cress | nucleus | 33.66 | 34.24 |
| CDY44890 | Canola | nucleus | 33.17 | 34.16 |
| CDX81527 | Canola | nucleus | 33.17 | 34.16 |
| CDY04230 | Canola | nucleus | 18.89 | 33.91 |
| Bra033925.1-P | Field mustard | nucleus | 32.69 | 33.67 |
| PGSC0003DMT400037755 | Potato | nucleus | 36.32 | 33.56 |
| Zm00001d017939_P001 | Maize | nucleus | 37.77 | 33.55 |
| CDY36106 | Canola | nucleus | 29.3 | 31.51 |
| Bra010994.1-P | Field mustard | nucleus | 29.78 | 30.22 |
| Bra004035.1-P | Field mustard | nucleus | 32.69 | 28.48 |
| PGSC0003DMT400020030 | Potato | nucleus | 32.93 | 24.16 |
| Zm00001d049651_P001 | Maize | mitochondrion, nucleus, peroxisome, plastid | 13.8 | 21.03 |
| Zm00001d035134_P001 | Maize | plastid | 12.83 | 19.85 |
| Zm00001d053880_P001 | Maize | plastid | 19.37 | 16.91 |
| Zm00001d015268_P001 | Maize | plastid | 17.19 | 15.04 |
| Zm00001d014664_P001 | Maize | plastid | 14.53 | 13.79 |
Protein Annotations
| EntrezGene:100283174 | MapMan:15.5.1.2 | ProteinID:AQK63542.1 | UniProt:B6TFB2 | InterPro:CCT_domain | EMBL:EU963677 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0008270 | InterPro:IPR000315 | InterPro:IPR010402 | EMBL:KJ727843 | PFAM:PF00643 |
| PFAM:PF06203 | PFscan:PS50119 | PFscan:PS51017 | PANTHER:PTHR31874 | PANTHER:PTHR31874:SF20 | SMART:SM00336 |
| UniParc:UPI000182E153 | EnsemblPlantsGene:Zm00001d013443 | EnsemblPlants:Zm00001d013443_P001 | EnsemblPlants:Zm00001d013443_T001 | InterPro:Znf_B-box | SEG:seg |
Description
C2C2-CO-like-transcription factor 8CCT motif family protein
Coordinates
chr5:-:11710780..11712488
Molecular Weight (calculated)
45370.6 Da
IEP (calculated)
7.148
GRAVY (calculated)
-0.623
Length
413 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSAGAATGA ALGARTARSC DGCMRRRARW HCPADDAFLC QTCDVSVHSA NPLARRHHRV RLPSASCSSP PRDPDAPTWL HGLKRRPRTP RSKPGGSKSN
101: KHEATPSFIA AAASSAAVPD LEAEESGSGI LGGNDDHHGF LQDDDEDLLY RVPVFDPMLA EFYNPVADEG EQKPACSLLM PSLAETSPEF ASGGSAEADG
201: LSVSFHVPDM ELASFAADME SLLMGVDDDG FDCLGFLDEE KPQVNADLDA IVAPAPEPED KKRKRPEMIL KLNYEGVIAS WVRDGGSPWF HGERPHLDCH
301: ELWSDDFTTG SRELLGGAVT PVTGGEREAR VSRYREKRRT RLFAKKIRYE VRKLNAEKRP RMKGRFVKRA TLPPLPRPPP PQQQQQQKQL PRAPPHVGMV
401: LPPPPVSNGR LWF
101: KHEATPSFIA AAASSAAVPD LEAEESGSGI LGGNDDHHGF LQDDDEDLLY RVPVFDPMLA EFYNPVADEG EQKPACSLLM PSLAETSPEF ASGGSAEADG
201: LSVSFHVPDM ELASFAADME SLLMGVDDDG FDCLGFLDEE KPQVNADLDA IVAPAPEPED KKRKRPEMIL KLNYEGVIAS WVRDGGSPWF HGERPHLDCH
301: ELWSDDFTTG SRELLGGAVT PVTGGEREAR VSRYREKRRT RLFAKKIRYE VRKLNAEKRP RMKGRFVKRA TLPPLPRPPP PQQQQQQKQL PRAPPHVGMV
401: LPPPPVSNGR LWF
001: MMKSLANAVG AKTARACDSC VKRRARWYCA ADDAFLCQSC DSLVHSANPL ARRHERVRLK TASPAVVKHS NHSSASPPHE VATWHHGFTR KARTPRGSGK
101: KNNSSIFHDL VPDISIEDQT DNYELEEQLI CQVPVLDPLV SEQFLNDVVE PKIEFPMIRS GLMIEEEEDN AESCLNGFFP TDMELEEFAA DVETLLGRGL
201: DTESYAMEEL GLSNSEMFKI EKDEIEEEVE EIKAMSMDIF DDDRKDVDGT VPFELSFDYE SSHKTSEEEV MKNVESSGEC VVKVKEEEHK NVLMLRLNYD
301: SVISTWGGQG PPWSSGEPPE RDMDISGWPA FSMVENGGES THQKQYVGGC LPSSGFGDGG REARVSRYRE KRRTRLFSKK IRYEVRKLNA EKRPRMKGRF
401: VKRASLAAAA SPLGVNY
101: KNNSSIFHDL VPDISIEDQT DNYELEEQLI CQVPVLDPLV SEQFLNDVVE PKIEFPMIRS GLMIEEEEDN AESCLNGFFP TDMELEEFAA DVETLLGRGL
201: DTESYAMEEL GLSNSEMFKI EKDEIEEEVE EIKAMSMDIF DDDRKDVDGT VPFELSFDYE SSHKTSEEEV MKNVESSGEC VVKVKEEEHK NVLMLRLNYD
301: SVISTWGGQG PPWSSGEPPE RDMDISGWPA FSMVENGGES THQKQYVGGC LPSSGFGDGG REARVSRYRE KRRTRLFSKK IRYEVRKLNA EKRPRMKGRF
401: VKRASLAAAA SPLGVNY
Arabidopsis Description
COL16Zinc finger protein CONSTANS-LIKE 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWD0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.