Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G314300.1 | Wheat | nucleus | 78.76 | 59.73 |
| TraesCS7D01G311500.1 | Wheat | nucleus | 76.11 | 59.31 |
| TraesCS7B01G215100.1 | Wheat | nucleus | 76.55 | 58.64 |
| HORVU7Hr1G074920.1 | Barley | extracellular, mitochondrion | 62.83 | 47.65 |
| Zm00001d049651_P001 | Maize | mitochondrion, nucleus, peroxisome, plastid | 43.81 | 36.53 |
| KXG24303 | Sorghum | mitochondrion, nucleus | 47.35 | 36.27 |
| Os08t0119700-00 | Rice | plastid | 55.75 | 35.59 |
| Zm00001d035134_P001 | Maize | plastid | 41.59 | 35.21 |
| HORVU2Hr1G056960.1 | Barley | peroxisome | 11.06 | 23.81 |
| GSMUA_Achr10P... | Banana | nucleus | 26.11 | 20.49 |
| GSMUA_Achr11P... | Banana | nucleus | 14.6 | 17.46 |
| VIT_14s0219g00220.t01 | Wine grape | nucleus, plastid | 21.68 | 15.81 |
| Bra023461.1-P | Field mustard | cytosol | 10.62 | 15.69 |
| PGSC0003DMT400032849 | Potato | nucleus | 21.68 | 15.17 |
| Solyc02g093590.2.1 | Tomato | nucleus | 21.24 | 15.0 |
| CDX70561 | Canola | nucleus | 9.73 | 14.57 |
| CDX85600 | Canola | nucleus | 19.03 | 13.52 |
| CDX91067 | Canola | nucleus | 18.58 | 13.0 |
| AT5G14370.1 | Thale cress | nucleus | 19.47 | 12.98 |
| CDX69586 | Canola | nucleus, plastid | 18.58 | 12.73 |
| Bra006252.1-P | Field mustard | nucleus | 16.81 | 12.62 |
| CDX78575 | Canola | nucleus | 16.81 | 12.62 |
| KRH07084 | Soybean | plastid | 19.47 | 12.43 |
| CDY09849 | Canola | nucleus | 17.7 | 12.08 |
| KRG94369 | Soybean | plastid | 18.58 | 11.86 |
| Bra023462.1-P | Field mustard | nucleus | 7.52 | 10.69 |
| Bra008763.1-P | Field mustard | nucleus, plastid | 18.58 | 7.85 |
| HORVU7Hr1G097630.2 | Barley | cytosol, nucleus | 9.73 | 7.46 |
| HORVU4Hr1G007420.1 | Barley | nucleus, plastid | 11.95 | 6.59 |
| HORVU6Hr1G021460.2 | Barley | plastid | 13.27 | 6.12 |
| HORVU6Hr1G073170.1 | Barley | nucleus | 11.95 | 5.42 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G074960.1 | EnsemblPlantsGene:HORVU7Hr1G074960 | PANTHER:PTHR31874 | PANTHER:PTHR31874:SF6 | SEG:seg | UniParc:UPI000B478E5E |
| UniProt:A0A287WX93 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:+:431415884..431418173
Molecular Weight (calculated)
19518.6 Da
IEP (calculated)
9.785
GRAVY (calculated)
-0.336
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGGGGGRR RGSRRAKVKK KKKTKYLSLS RHLAKAVEVD KPAESLSAED SLPPPXXXXX XXXXXXXXXX XXXXXXXXXX XXXXPFALHP EAPSTLFAAA
101: PSLTDILGLS SSSFSGGGEG DSPACTPSPD ASAGTAGGEE DLARRALRGR ERWVYCRSSS SSPSAATATT TTSSSCSSAA STGAASARSP LLKLDYDEIL
201: AAWAGRGSLY IDGAAGHSXX XXXXWF
101: PSLTDILGLS SSSFSGGGEG DSPACTPSPD ASAGTAGGEE DLARRALRGR ERWVYCRSSS SSPSAATATT TTSSSCSSAA STGAASARSP LLKLDYDEIL
201: AAWAGRGSLY IDGAAGHSXX XXXXWF
001: MCSNKASPVV GEEKQSTRSS KRIKKRKNRE ATTTMEDKSS SNLDASRKIR TKTKKPKFLS LKLELNTSHE INENPRSKKS KKKNNNKKQS KKKEPDTTPF
101: KEKKRAETTT TLGGGEKEEE QYDTVAAYLF NSATDSTISS IHDLLPSSAA TDVDCGGERN NLSPYDRQDH GSSSSSLLRT AMRKGASEEE ETTEERWVSY
201: SEVVEEVMSR SGTPRCCGGG DGNDGRPSLA LKLDYEQIME AWSDKGTLYV DGEPPQTVPD LHASADGFND GGEAGNLWAV PEMETTERLW RGHREASLLR
301: YKEKRQNRLF SKRIRYQVRK LNAEKRPRVK GRFVKREDS
101: KEKKRAETTT TLGGGEKEEE QYDTVAAYLF NSATDSTISS IHDLLPSSAA TDVDCGGERN NLSPYDRQDH GSSSSSLLRT AMRKGASEEE ETTEERWVSY
201: SEVVEEVMSR SGTPRCCGGG DGNDGRPSLA LKLDYEQIME AWSDKGTLYV DGEPPQTVPD LHASADGFND GGEAGNLWAV PEMETTERLW RGHREASLLR
301: YKEKRQNRLF SKRIRYQVRK LNAEKRPRVK GRFVKREDS
Arabidopsis Description
CCT motif family protein [Source:UniProtKB/TrEMBL;Acc:Q949T9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.