Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH17099 | Soybean | nucleus | 81.3 | 85.0 |
| VIT_06s0004g07210.t01 | Wine grape | nucleus | 33.48 | 76.24 |
| AT1G07050.2 | Thale cress | nucleus | 41.74 | 48.48 |
| Bra015548.1-P | Field mustard | nucleus | 38.26 | 43.35 |
| CDY07383 | Canola | cytosol | 22.17 | 22.17 |
| KRG94369 | Soybean | plastid | 29.13 | 18.93 |
| KRH07084 | Soybean | plastid | 28.26 | 18.36 |
| KRH60334 | Soybean | nucleus | 26.52 | 16.71 |
| KRH41630 | Soybean | nucleus | 26.09 | 16.17 |
| KRH19100 | Soybean | nucleus | 24.35 | 14.04 |
| KRH02778 | Soybean | nucleus, plastid | 23.91 | 13.82 |
| KRH35955 | Soybean | nucleus | 23.91 | 13.13 |
| KRG90815 | Soybean | nucleus | 23.48 | 12.92 |
| KRH48479 | Soybean | nucleus | 23.91 | 12.88 |
| KRH39195 | Soybean | nucleus | 25.22 | 12.08 |
| KRH12328 | Soybean | plastid | 20.43 | 11.9 |
| KRH37334 | Soybean | nucleus, plastid | 18.7 | 11.5 |
| KRH13468 | Soybean | cytosol | 2.61 | 6.06 |
| CDY07382 | Canola | nucleus | 0.43 | 2.27 |
Protein Annotations
| EntrezGene:100803772 | MapMan:35.1 | EMBL:ACUP02001237 | InterPro:CCT_domain | EnsemblPlantsGene:GLYMA_02G230800 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| UniProt:I1JHH0 | InterPro:IPR010402 | EnsemblPlants:KRH72745 | ProteinID:KRH72745 | ProteinID:KRH72745.1 | PFAM:PF06203 |
| PFscan:PS51017 | PANTHER:PTHR31874 | PANTHER:PTHR31874:SF18 | UniParc:UPI00023BC618 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr2:+:41829559..41831187
Molecular Weight (calculated)
27258.6 Da
IEP (calculated)
4.379
GRAVY (calculated)
-0.957
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCTSLLRSP KKEEQEVPDA NSNQPYTYED FNILDELEGV LSTKEEQDSS LPQQKSSSSE FHWDFMEWEE FQPPNIEEEG EDENEGKENR RSKCLFDEEE
101: QEMKIENNNN IVGFWEMDDE KMVALNLNLN YQEVLDAWSD RGSLWADDCS LSFATNNAYY MGEVPVLEEE RARREACVLR YKEKRQNRLF SKKIRYQVRK
201: LNADKRPRIK VTFLNFPVSF RPIGYAHFVF
101: QEMKIENNNN IVGFWEMDDE KMVALNLNLN YQEVLDAWSD RGSLWADDCS LSFATNNAYY MGEVPVLEEE RARREACVLR YKEKRQNRLF SKKIRYQVRK
201: LNADKRPRIK VTFLNFPVSF RPIGYAHFVF
001: MDTQRLPKKE EEEEEDHLLS STFESINGHS RDQHNHSIDD FESIFDITID NLSCSNELTW DFWEEDEDED VGEEEKRSST DQEGSSFGFW ENKPTDYEDK
101: DLGLKLNLNH QEVIDAWSDH QKPLWTDTST LDNSVYRGEV PVIEEKRNMR REASVLRYKE KRQSRLFSKK IRYQVRKLNA DKRPRFKVSF LFLLLSTL
101: DLGLKLNLNH QEVIDAWSDH QKPLWTDTST LDNSVYRGEV PVIEEKRNMR REASVLRYKE KRQSRLFSKK IRYQVRKLNA DKRPRFKVSF LFLLLSTL
Arabidopsis Description
CCT motif family protein [Source:TAIR;Acc:AT1G07050]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.