Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH72745 | Soybean | nucleus | 85.0 | 81.3 |
| VIT_06s0004g07210.t01 | Wine grape | nucleus | 36.82 | 80.2 |
| AT1G07050.2 | Thale cress | nucleus | 44.09 | 48.99 |
| Bra015548.1-P | Field mustard | nucleus | 43.64 | 47.29 |
| CDY07383 | Canola | cytosol | 25.0 | 23.91 |
| KRH07084 | Soybean | plastid | 30.45 | 18.93 |
| KRG94369 | Soybean | plastid | 30.0 | 18.64 |
| KRH60334 | Soybean | nucleus | 30.0 | 18.08 |
| KRH41630 | Soybean | nucleus | 29.09 | 17.25 |
| KRH19100 | Soybean | nucleus | 27.27 | 15.04 |
| KRH02778 | Soybean | nucleus, plastid | 26.82 | 14.82 |
| KRH35955 | Soybean | nucleus | 27.73 | 14.56 |
| KRH48479 | Soybean | nucleus | 27.73 | 14.29 |
| KRG90815 | Soybean | nucleus | 26.82 | 14.11 |
| KRH39195 | Soybean | nucleus | 29.09 | 13.33 |
| KRH12328 | Soybean | plastid | 21.36 | 11.9 |
| KRH37334 | Soybean | nucleus, plastid | 19.55 | 11.5 |
| KRH13468 | Soybean | cytosol | 2.73 | 6.06 |
| CDY07382 | Canola | nucleus | 0.45 | 2.27 |
Protein Annotations
| EMBL:ACUP02009046 | EnsemblPlants:KRH17099 | EnsemblPlantsGene:GLYMA_14G197900 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:CCT_domain | InterPro:IPR010402 |
| PANTHER:PTHR31874 | PANTHER:PTHR31874:SF18 | PFAM:PF06203 | PFscan:PS51017 | ProteinID:KRH17099 | ProteinID:KRH17099.1 |
| SEG:seg | UniParc:UPI000233B3FF | UniProt:A0A0R0GQG6 | MapMan:15.5.1.2 | : | : |
Description
hypothetical protein
Coordinates
chr14:+:46327072..46328700
Molecular Weight (calculated)
25878.0 Da
IEP (calculated)
4.831
GRAVY (calculated)
-1.096
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCTSLLRSP KKEEQEVPDA NSNQAYTYEG FSILDELEGV LNTKEEQNFP QQNSSSGGEL HWDFMEWEEF QPPNVGEEGE DENEGKEHTR KNTRSKCLFE
101: EEQAIIRRES NNNIVGFWEV DDEKMVALNL NLNYQEVLDA WSDRGSLWAD DCSLSFPTNN AYYMGEVPVL EEERARREAS VLRYKEKRQN RLFSKKIRYQ
201: VRKLNADKRP RIKGRFVKRH
101: EEQAIIRRES NNNIVGFWEV DDEKMVALNL NLNYQEVLDA WSDRGSLWAD DCSLSFPTNN AYYMGEVPVL EEERARREAS VLRYKEKRQN RLFSKKIRYQ
201: VRKLNADKRP RIKGRFVKRH
001: MDTQRLPKKE EEEEEDHLLS STFESINGHS RDQHNHSIDD FESIFDITID NLSCSNELTW DFWEEDEDED VGEEEKRSST DQEGSSFGFW ENKPTDYEDK
101: DLGLKLNLNH QEVIDAWSDH QKPLWTDTST LDNSVYRGEV PVIEEKRNMR REASVLRYKE KRQSRLFSKK IRYQVRKLNA DKRPRFKGRF VKRET
101: DLGLKLNLNH QEVIDAWSDH QKPLWTDTST LDNSVYRGEV PVIEEKRNMR REASVLRYKE KRQSRLFSKK IRYQVRKLNA DKRPRFKGRF VKRET
Arabidopsis Description
CCT motif family protein [Source:TAIR;Acc:AT1G07050]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.