Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028490.1-P | Field mustard | cytosol, plastid | 93.73 | 90.8 |
| CDY39753 | Canola | cytosol | 84.59 | 87.25 |
| CDY46387 | Canola | cytosol | 83.69 | 86.0 |
| CDY66426 | Canola | cytosol, plastid | 61.29 | 72.92 |
| VIT_02s0025g03690.t01 | Wine grape | cytosol | 59.14 | 52.13 |
| PGSC0003DMT400076613 | Potato | plastid | 58.42 | 50.94 |
| GSMUA_Achr9P23650_001 | Banana | cytosol | 51.79 | 50.35 |
| Solyc08g007990.2.1 | Tomato | plastid | 57.53 | 50.0 |
| KRH41155 | Soybean | nucleus | 56.45 | 49.68 |
| KRH59854 | Soybean | nucleus, plastid | 56.27 | 49.68 |
| PGSC0003DMT400014917 | Potato | plastid | 56.63 | 49.22 |
| HORVU6Hr1G007020.2 | Barley | cytosol, plastid | 48.57 | 48.48 |
| Os02t0114700-01 | Rice | cytosol | 48.92 | 47.4 |
| TraesCS6B01G053000.1 | Wheat | plastid | 48.92 | 46.51 |
| Zm00001d014988_P001 | Maize | plastid | 47.49 | 46.49 |
| EES04356 | Sorghum | plastid | 48.39 | 46.39 |
| TraesCS6D01G043500.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 48.92 | 46.35 |
| TraesCS6A01G037800.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 48.57 | 46.25 |
| Zm00001d054047_P001 | Maize | cytosol, plastid | 47.49 | 45.53 |
| CDY25417 | Canola | endoplasmic reticulum, extracellular | 44.09 | 39.49 |
Protein Annotations
| MapMan:17.1.1.8.3 | MapMan:17.1.3.2.1.6 | Gene3D:3.30.40.120 | Gene3D:3.40.50.1010 | GO:A0A078BS71 | EnsemblPlants:CDX67491 |
| ProteinID:CDX67491 | ProteinID:CDX67491.1 | ncoils:Coil | GO:GO:0000469 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004518 | GO:GO:0004521 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0042274 | EnsemblPlantsGene:GSBRNA2T00098603001 | InterPro:IPR036283 | InterPro:NOB1_Zf-like_sf | InterPro:NOB1_Zn-bd |
| InterPro:Nob1_euk | PFAM:PF08772 | PFAM:PF17146 | PIRSF:PIRSF037125 | PANTHER:PTHR12814 | InterPro:Ribonuclease_PIN |
| SUPFAM:SSF144206 | UniParc:UPI0004EE859F | SEG:seg | : | : | : |
Description
BnaA07g15310D
Coordinates
chrLK031787:-:545917..548268
Molecular Weight (calculated)
61444.1 Da
IEP (calculated)
4.960
GRAVY (calculated)
-0.624
Length
558 amino acids
Sequence
(BLAST)
(BLAST)
001: MESSPASMWS SIVKKDPPAN PQTTDVAPAA ILGMVGNCKS TKGISVAVVD ANAVIDGRQS LTDFADKFVT VPEVLSEIRD SDSRRRLEFI PFAIETMEPS
101: PESLSKVIKF AKATGDLHTL SDVDLKLIAL TYTLEAEVHG TKNLRDVPPP IQTVRVKRLP EKELPGWGSN VANLEEWEAL ENETEENSNT ASKILPLKDL
201: NMNILPSDSC SEVGSVVSHT GDEEEEVEGI DASQGENDDD GGGGEWRPAV SSSTHRKFLR RKAKWEHYNA LAEKEIQKEQ EADKAANFTN DQMSNNAEDK
301: RGKDSGKNDE ELSSILKDMR LEEGTEETNL RNGEDDDEVE AEGIDAVSEA GDTFEASSMA DDGSSEQSWS LRALSESSVA CITGDYAMQN VIIQMGLRLL
401: APGGMQIRQL NRWVLKCHAC YTVTPEIGRI FCPKCGNGGT LRKVAVTIGE NGTIVAARKP RVTLRGTKFS IPMPKSGRDA ITKNLVLRED QLPQKYLHPK
501: TKKKASKPGD EYFVSDDVFM NHHSDRKAPL QPPVRKAMAV FSQKRNPNDN HYSRSMHC
101: PESLSKVIKF AKATGDLHTL SDVDLKLIAL TYTLEAEVHG TKNLRDVPPP IQTVRVKRLP EKELPGWGSN VANLEEWEAL ENETEENSNT ASKILPLKDL
201: NMNILPSDSC SEVGSVVSHT GDEEEEVEGI DASQGENDDD GGGGEWRPAV SSSTHRKFLR RKAKWEHYNA LAEKEIQKEQ EADKAANFTN DQMSNNAEDK
301: RGKDSGKNDE ELSSILKDMR LEEGTEETNL RNGEDDDEVE AEGIDAVSEA GDTFEASSMA DDGSSEQSWS LRALSESSVA CITGDYAMQN VIIQMGLRLL
401: APGGMQIRQL NRWVLKCHAC YTVTPEIGRI FCPKCGNGGT LRKVAVTIGE NGTIVAARKP RVTLRGTKFS IPMPKSGRDA ITKNLVLRED QLPQKYLHPK
501: TKKKASKPGD EYFVSDDVFM NHHSDRKAPL QPPVRKAMAV FSQKRNPNDN HYSRSMHC
001: MDPKPTSMWS SIVKKDPPSK PPVNDGAPAA ILGMVGNCKS TKGISIAVVD ANAIIEGRQS LTNFADKFVT VPEVLSEIRD PASRRRLAFI PFTIDTMEPS
101: PESLSKVIKF ARATGDLQSL SDVDLKLIAL SYTLEAQVYG TKNLRDVPPP IQTVRVKRLP EKDLPGWGSN VANLEEWEAL ENETEEKSNA NSKILPLKDL
201: NMNIIASDNV SEVGSVVSHT ENHEEDVQEG GKKHRRYPPK KTEIKLEGKM VVEGVDASQG QYDDDDDASD WRPAVSRSTH SKYLRRKARW EHYNALAEQE
301: IQKDQEADKA RHTKEANETH AKDSGKNGED ISSILKDMRL EEESLRALQE ETEETNAEAT LINGEDDIDH DIEVEAEGID VANQALENLE IASEAEDTFE
401: ASSIGDDGSS EQSWSLRALS ESSVACITGD YAMQNVILQM GLRLLAPGGM QIRQLHRWIL KCHACYTVTP EIGRIFCPKC GNGGTLRKVA VTIGANGAII
501: AACKPRITLR GTQYSIPMPK GGREAITKNL ILREDQLPQK LLHPRTKKKA SKPGDEYFVS DDVFLNHHSD RKAPLQPPVR KAMSVFSQKR NPNDNHYSRS
601: MH
101: PESLSKVIKF ARATGDLQSL SDVDLKLIAL SYTLEAQVYG TKNLRDVPPP IQTVRVKRLP EKDLPGWGSN VANLEEWEAL ENETEEKSNA NSKILPLKDL
201: NMNIIASDNV SEVGSVVSHT ENHEEDVQEG GKKHRRYPPK KTEIKLEGKM VVEGVDASQG QYDDDDDASD WRPAVSRSTH SKYLRRKARW EHYNALAEQE
301: IQKDQEADKA RHTKEANETH AKDSGKNGED ISSILKDMRL EEESLRALQE ETEETNAEAT LINGEDDIDH DIEVEAEGID VANQALENLE IASEAEDTFE
401: ASSIGDDGSS EQSWSLRALS ESSVACITGD YAMQNVILQM GLRLLAPGGM QIRQLHRWIL KCHACYTVTP EIGRIFCPKC GNGGTLRKVA VTIGANGAII
501: AACKPRITLR GTQYSIPMPK GGREAITKNL ILREDQLPQK LLHPRTKKKA SKPGDEYFVS DDVFLNHHSD RKAPLQPPVR KAMSVFSQKR NPNDNHYSRS
601: MH
Arabidopsis Description
RNA-binding NOB1-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FLL1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.