Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G007020.2 | Barley | cytosol, plastid | 89.44 | 93.92 |
| TraesCS6D01G043500.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 92.33 | 92.02 |
| TraesCS6A01G037800.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 89.61 | 89.76 |
| Os02t0114700-01 | Rice | cytosol | 77.0 | 78.47 |
| EES04356 | Sorghum | plastid | 75.98 | 76.63 |
| Zm00001d054047_P001 | Maize | cytosol, plastid | 75.13 | 75.77 |
| Zm00001d014988_P001 | Maize | plastid | 72.23 | 74.39 |
| GSMUA_Achr9P23650_001 | Banana | cytosol | 54.86 | 56.1 |
| CDY39753 | Canola | cytosol | 46.85 | 50.83 |
| CDY46387 | Canola | cytosol | 46.17 | 49.91 |
| Bra025513.1-P | Field mustard | cytosol | 47.87 | 49.04 |
| CDX67491 | Canola | cytosol | 46.51 | 48.92 |
| Bra028490.1-P | Field mustard | cytosol, plastid | 45.83 | 46.7 |
| VIT_02s0025g03690.t01 | Wine grape | cytosol | 50.26 | 46.6 |
| PGSC0003DMT400076613 | Potato | plastid | 50.6 | 46.41 |
| AT5G41190.1 | Thale cress | cytosol | 46.68 | 45.51 |
| PGSC0003DMT400014917 | Potato | plastid | 49.57 | 45.33 |
| Solyc08g007990.2.1 | Tomato | plastid | 49.06 | 44.86 |
| KRH59854 | Soybean | nucleus, plastid | 48.21 | 44.78 |
| KRH41155 | Soybean | nucleus | 47.02 | 43.53 |
| CDY66426 | Canola | cytosol, plastid | 32.37 | 40.51 |
| CDY25417 | Canola | endoplasmic reticulum, extracellular | 22.83 | 21.51 |
Protein Annotations
| MapMan:17.1.1.8.3 | MapMan:17.1.3.2.1.6 | Gene3D:3.30.40.120 | Gene3D:3.40.50.1010 | GO:GO:0000469 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004521 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006364 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009553 | GO:GO:0009555 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0042274 | InterPro:IPR036283 |
| InterPro:NOB1_Zf-like_sf | InterPro:NOB1_Zn-bd | InterPro:Nob1_euk | PFAM:PF08772 | PFAM:PF17146 | PIRSF:PIRSF037125 |
| PANTHER:PTHR12814 | InterPro:Ribonuclease_PIN | SUPFAM:SSF144206 | EnsemblPlantsGene:TraesCS6B01G053000 | EnsemblPlants:TraesCS6B01G053000.1 | TIGR:cd09876 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr6B:+:32328745..32332003
Molecular Weight (calculated)
63022.2 Da
IEP (calculated)
4.986
GRAVY (calculated)
-0.416
Length
587 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEAWPALAP AAGGAAFPPA PPTGTAPPAP VAWGAAAAAR REAVARESPA QAVSRIVSSC ANTSGLAVAV VDANAVISGG AALASTAGRL VTVPEVLEEV
101: RDAAARRRLA LLPTPVETVE PAPEFVKKVV KFARETGDLQ TLSDVDMKII ALAYMLEAEV HGTSHLREHP PPLHVVSVRT LQEAPLPGWG SNVPNLAEWE
201: ALDKMSEAGG DLNSRILPLK DLENQEIPTS ETNSVSEAQG DAEFQPSKRD ACIPWEDDEN NEGWLPAVGR TTHRKYLRRK ARRDALKASG QSFDTSSVAP
301: SVDEDNDLSE NGLDSVDGPS AVPEETRSNA DNLESLEGNE PKIAGDQLSN GENGVGDADT VEGIIDTDSC TEQLDNLDIK SEAEEGVSVS FVDDESSEQS
401: WALRSLSEST VACVTSDYAM QNVILQIGLR LLAPGGMQIR QLHRWVLRCH ACYKVTQEIG KIFCPKCGNG GTLRKVSVTV GENGITMASR RPRVTLRGTK
501: FSLPMPQGGR DAVIKNPILR EDQLPQKVLH PKSKKSSKLG DDFLGAEDIF THSGEKKVEL KPPVRKALAM FSGKRNPNDN HFSRKKN
101: RDAAARRRLA LLPTPVETVE PAPEFVKKVV KFARETGDLQ TLSDVDMKII ALAYMLEAEV HGTSHLREHP PPLHVVSVRT LQEAPLPGWG SNVPNLAEWE
201: ALDKMSEAGG DLNSRILPLK DLENQEIPTS ETNSVSEAQG DAEFQPSKRD ACIPWEDDEN NEGWLPAVGR TTHRKYLRRK ARRDALKASG QSFDTSSVAP
301: SVDEDNDLSE NGLDSVDGPS AVPEETRSNA DNLESLEGNE PKIAGDQLSN GENGVGDADT VEGIIDTDSC TEQLDNLDIK SEAEEGVSVS FVDDESSEQS
401: WALRSLSEST VACVTSDYAM QNVILQIGLR LLAPGGMQIR QLHRWVLRCH ACYKVTQEIG KIFCPKCGNG GTLRKVSVTV GENGITMASR RPRVTLRGTK
501: FSLPMPQGGR DAVIKNPILR EDQLPQKVLH PKSKKSSKLG DDFLGAEDIF THSGEKKVEL KPPVRKALAM FSGKRNPNDN HFSRKKN
001: MDPKPTSMWS SIVKKDPPSK PPVNDGAPAA ILGMVGNCKS TKGISIAVVD ANAIIEGRQS LTNFADKFVT VPEVLSEIRD PASRRRLAFI PFTIDTMEPS
101: PESLSKVIKF ARATGDLQSL SDVDLKLIAL SYTLEAQVYG TKNLRDVPPP IQTVRVKRLP EKDLPGWGSN VANLEEWEAL ENETEEKSNA NSKILPLKDL
201: NMNIIASDNV SEVGSVVSHT ENHEEDVQEG GKKHRRYPPK KTEIKLEGKM VVEGVDASQG QYDDDDDASD WRPAVSRSTH SKYLRRKARW EHYNALAEQE
301: IQKDQEADKA RHTKEANETH AKDSGKNGED ISSILKDMRL EEESLRALQE ETEETNAEAT LINGEDDIDH DIEVEAEGID VANQALENLE IASEAEDTFE
401: ASSIGDDGSS EQSWSLRALS ESSVACITGD YAMQNVILQM GLRLLAPGGM QIRQLHRWIL KCHACYTVTP EIGRIFCPKC GNGGTLRKVA VTIGANGAII
501: AACKPRITLR GTQYSIPMPK GGREAITKNL ILREDQLPQK LLHPRTKKKA SKPGDEYFVS DDVFLNHHSD RKAPLQPPVR KAMSVFSQKR NPNDNHYSRS
601: MH
101: PESLSKVIKF ARATGDLQSL SDVDLKLIAL SYTLEAQVYG TKNLRDVPPP IQTVRVKRLP EKDLPGWGSN VANLEEWEAL ENETEEKSNA NSKILPLKDL
201: NMNIIASDNV SEVGSVVSHT ENHEEDVQEG GKKHRRYPPK KTEIKLEGKM VVEGVDASQG QYDDDDDASD WRPAVSRSTH SKYLRRKARW EHYNALAEQE
301: IQKDQEADKA RHTKEANETH AKDSGKNGED ISSILKDMRL EEESLRALQE ETEETNAEAT LINGEDDIDH DIEVEAEGID VANQALENLE IASEAEDTFE
401: ASSIGDDGSS EQSWSLRALS ESSVACITGD YAMQNVILQM GLRLLAPGGM QIRQLHRWIL KCHACYTVTP EIGRIFCPKC GNGGTLRKVA VTIGANGAII
501: AACKPRITLR GTQYSIPMPK GGREAITKNL ILREDQLPQK LLHPRTKKKA SKPGDEYFVS DDVFLNHHSD RKAPLQPPVR KAMSVFSQKR NPNDNHYSRS
601: MH
Arabidopsis Description
RNA-binding NOB1-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FLL1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.