Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49250 | Canola | extracellular | 3.37 | 12.35 |
| CDY15651 | Canola | nucleus | 7.07 | 11.8 |
| CDX79848 | Canola | cytosol | 8.75 | 11.76 |
| CDX71926 | Canola | cytosol | 18.18 | 11.27 |
| CDY49249 | Canola | cytosol | 16.84 | 10.64 |
| CDX98329 | Canola | cytosol, peroxisome, plastid | 17.85 | 10.45 |
| CDX67764 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 17.85 | 10.43 |
| CDY00587 | Canola | cytosol | 16.16 | 10.21 |
| CDX71925 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 17.51 | 10.18 |
| CDY49252 | Canola | cytosol | 17.17 | 10.06 |
| CDX89002 | Canola | endoplasmic reticulum, golgi | 9.43 | 9.89 |
| CDX79851 | Canola | cytosol | 16.84 | 9.8 |
| CDY50821 | Canola | cytosol | 16.84 | 9.8 |
| CDY69998 | Canola | plastid | 5.39 | 9.7 |
| CDX95601 | Canola | mitochondrion | 14.14 | 8.84 |
| CDX83429 | Canola | mitochondrion | 14.14 | 8.84 |
| CDY23428 | Canola | mitochondrion | 14.14 | 8.84 |
| CDY30465 | Canola | mitochondrion | 14.14 | 8.84 |
| CDY42662 | Canola | mitochondrion | 13.8 | 8.69 |
| CDX89047 | Canola | mitochondrion | 13.47 | 8.47 |
| CDX77720 | Canola | cytosol | 5.39 | 7.88 |
| CDY58554 | Canola | cytosol | 2.69 | 6.4 |
| CDX71928 | Canola | cytosol | 17.17 | 6.17 |
| VIT_03s0088g00560.t01 | Wine grape | cytosol | 1.35 | 3.74 |
Protein Annotations
| EnsemblPlants:CDX71183 | EnsemblPlantsGene:GSBRNA2T00144708001 | ProteinID:CDX71183 | ProteinID:CDX71183.1 | SEG:seg | UniParc:UPI0004EEC685 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC07g04620D
Coordinates
chrLK031792:-:584077..584970
Molecular Weight (calculated)
32636.8 Da
IEP (calculated)
10.108
GRAVY (calculated)
0.223
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MYSRFGVCVT RPVTLWGTLH RSAVPVNINH SDSLSHHICY SGPMTVKYST CVVATPQIPR SMSSWLDLPS ASPTRSTAAS AIPVTHASSS RYSCSEDRHR
101: MPLLRPSQSL PSSIVSGILK SCVVGIPPFT RLSGLESLCL LSLSAPRSAT TLFISKVYRF GSLLWVSEKI CWVSTTCSGE HPSPPFDVPV SSPPISTFGV
201: SPRYSPSPVK RMVVSNPRVL SLWTWPFQSC GIRTVKVTLR LTHDVWVCVK SFKISDGFIR VFVMRLLLYL SFMKIVSVDT LCLLTVSTSS STEKSTL
101: MPLLRPSQSL PSSIVSGILK SCVVGIPPFT RLSGLESLCL LSLSAPRSAT TLFISKVYRF GSLLWVSEKI CWVSTTCSGE HPSPPFDVPV SSPPISTFGV
201: SPRYSPSPVK RMVVSNPRVL SLWTWPFQSC GIRTVKVTLR LTHDVWVCVK SFKISDGFIR VFVMRLLLYL SFMKIVSVDT LCLLTVSTSS STEKSTL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.