Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69998 | Canola | plastid | 39.41 | 48.48 |
| CDY15651 | Canola | nucleus | 7.39 | 8.43 |
| CDX79848 | Canola | cytosol | 8.37 | 7.69 |
| CDY49249 | Canola | cytosol | 17.24 | 7.45 |
| CDY30465 | Canola | mitochondrion | 17.24 | 7.37 |
| CDY42662 | Canola | mitochondrion | 16.75 | 7.2 |
| CDX89047 | Canola | mitochondrion | 16.75 | 7.2 |
| CDY23428 | Canola | mitochondrion | 16.75 | 7.16 |
| CDX95601 | Canola | mitochondrion | 16.75 | 7.16 |
| CDY49252 | Canola | cytosol | 17.73 | 7.1 |
| CDX98329 | Canola | cytosol, peroxisome, plastid | 17.73 | 7.1 |
| CDX67764 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 17.73 | 7.09 |
| CDX79851 | Canola | cytosol | 17.73 | 7.06 |
| CDY50821 | Canola | cytosol | 17.73 | 7.06 |
| CDX71925 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 17.73 | 7.05 |
| CDX83429 | Canola | mitochondrion | 16.26 | 6.95 |
| CDY58554 | Canola | cytosol | 3.94 | 6.4 |
| CDY00587 | Canola | cytosol | 14.78 | 6.38 |
| CDX71926 | Canola | cytosol | 14.78 | 6.26 |
| CDX71183 | Canola | mitochondrion | 7.88 | 5.39 |
| CDX89002 | Canola | endoplasmic reticulum, golgi | 7.39 | 5.3 |
| CDY49250 | Canola | extracellular | 1.97 | 4.94 |
| VIT_03s0088g00560.t01 | Wine grape | cytosol | 2.46 | 4.67 |
| CDX71928 | Canola | cytosol | 16.75 | 4.11 |
Protein Annotations
| EnsemblPlants:CDX77720 | EnsemblPlantsGene:GSBRNA2T00128725001 | ProteinID:CDX77720 | ProteinID:CDX77720.1 | SEG:seg | UniParc:UPI0004EF141A |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC07g19740D
Coordinates
chrLK031812:-:1290148..1290759
Molecular Weight (calculated)
22166.6 Da
IEP (calculated)
9.492
GRAVY (calculated)
-0.092
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEPSAINYF DAGEASGRRR RDLCQDFCSA SRSTIFCSVS FLLCDSLSDK SQPRLSLAVI KRDLCFRFGV CVTRPVTLWG TPHRSAVPVN INHNDSLSHH
101: VCYSGPMTVK YSTRVVATPQ IPRSMSSRLD LPSASPTRST AASAIPVTHT SSSRYSCSED LHRMPLLRPS QSLPSSIVSG ILKACVVGIP SFTRLSGLKS
201: RCL
101: VCYSGPMTVK YSTRVVATPQ IPRSMSSRLD LPSASPTRST AASAIPVTHT SSSRYSCSED LHRMPLLRPS QSLPSSIVSG ILKACVVGIP SFTRLSGLKS
201: RCL
0001: MDKKKNRADP LAAGRQKLQQ FRQKKADKGT DQKKDSKGST SQGKSSKKSN KSEKHERKPD TSAVSDEAQA PSPVTVGGAT SHVNVAEEVV DSPQTSSDTK
0101: AHEYVSVHGS SSEPDALQPG HTTSNDGSEA RKEVVNSEND ISKSLSTEEE NVKSINSGVA GTVDSLISDP ADSEKGVTHD DASNVDGIFA ASGNIAEGEG
0201: VEVEGGSGNV EKPHQPSSLQ EYIPDVSLIR ARGDQVTDEE DMEQFSELSA KAGVDKIATE ERQTSYPAVV DSSASPSHFS EGSSVAFDTV ELEGINGNFR
0301: SQQIREAAEL NEEKPETSID FPNNRDHVLS AEPEESSVAE MASQLQLPES VSISGVLSHE ETRKIDTLNL SAELTSAHVH EGRSVSFLQL MDIVKGLGQD
0401: EYQILCNARE AASSTEPGTS SLERLREELF VSSTMEDILH VQLTEQSHLQ IEFDHQHNQF VAEISQLRAS YSAVTERNDS LAEELSECQS KLYAATSSNT
0501: NLENQLLATE AQVEDFTAKM NELQLSLEKS LLDLSETKEK FINLQVENDT LVAVISSMND EKKELIEEKE SKNYEIKHLS SELCNCKNLA AILKAEVEQF
0601: ENTIGPLTDE KIHLVEEKYS LLGEAEKLQE ELANCKTVVT LQEVENSNMK ETLSLLTRQQ TMFEENNIHL REENEKAHLE LSAHLISETY LLSEYSNLKE
0701: GYTLLNNKLL KFQGEKEHLV EENDKLTQEL LTLQEHMSTV EEERTHLEVE LREAIARLDK LAEENTSLTS SIMVEKARMV DNGSADVSGL INQEISEKLG
0801: RSSEIGVSKQ SASFLENTQY TNLEEVREYT SEFSALMKNL EKGEKMVQNL EEAIKQILTD SSVSKSSDKG ATPAVSKLIQ AFESKRKPEE PESENAQLTD
0901: DLSEADQFVS VNVQIRNLRG LLDQLLLNAR KAGIQFNQLN DDRTSTNQRL EELNVEFASH QDHINVLEAD TIESKVSFEA LKHYSYELQH KNHDLELLCD
1001: SLKLRNDNIS VENTELNKKL NYCSLRIDEL EIQLENLQQN LTSFLSTMEE QLVALQDESE RAMMVEHELT SLMSEFGEAV VRLDDCLLRS GTSGAHTGLD
1101: MTKRISGSVD VAVNVIEDLK EKLEAAYVKH ESTSNKYEEL KQSFNTLFEK NEFTASSMQK VYADLTKLIT ESCGSAEMTS LEVENVAVFD PFRDGSFENL
1201: LEAVRKILSE RLELQSVIDK LQSDLSSKSN DMEEMTQRSL DSTSLRELVE KVEGLLELES GVIFESPSSQ VEFLVSQLVQ KFIEIEELAN LLRKQLEAKG
1301: NELMEIEESL LHHKTKIAGL RESLTQAEES LVAVRSELQD KSNELEQSEQ RLLSTREKLS IAVTKGKGLI VQRDNVKQSL AEASAKLQKC SEELNSKDAR
1401: LVEVEKKLKT YIEAGERVEA LESELSYIRN SATALRESFL LKDSLLHRIE EILEDLDLPE HFHARDILEK VEWLARSANG NSSRPSGWDQ KSSDGGAGFV
1501: LSEPWREDVQ TGTSSEDDLR IKFEELKGKF YGLAEQNEML EQSLMERNTL VQRWEKLLEN IDIPPQLHSM EVENKIEWLA STITEATHDR DNLQQKIDNL
1601: EVYCQSVTTD LEVSQKQVGD VEGNLQSCVS ERVNLSERLE SLIGDHESLS ARGIHLEVEN EKLQNQVKDL HEKLVEKLGN EEHFQTIEGD LLSLRYMIDD
1701: VIQEDGLQDL ALASNSENLD GVLRKLIDYY KNLVKSSLPG ETDDNVCETR PSDADVRSGE SLGAHGATSH GQHFELSDSN VVEATSRDIA VVETPDVASL
1801: TKDLDQALHV QKLTREERDL YMAKQQSLVA ENEALDKKII ELQEFLKQEE QKSASVREKL NVAVRKGKAL VQQRDSLKQT IEEVNAELGR LKSEIIKRDE
1901: KLLENEKKFR ELESYSVRVE SLESECQLLK IHSQETEYLL QERSGNLSMT LNALNSIDIG DEGDINDPVM KLQRISQLFQ TMSTTVTSAE QESRKSRRAA
2001: ELLLAELNEV QETNDSLQED LSKFTYEIQQ LSREKDAAEA AKVEAISRFE NLSAVSNEEK NKLYAQLLSC GTSVNSLRKI LAGTNSCLAD IFIMDMEFLH
2101: HLKANMELCA KKTGTDLSGL PQLSTENLVD KEIFARLSAA WSNINLHETS SGGNIAEICG SLSQNLDQFV VGVSHLEEKV SKHLATWHDQ INIVSNSIDT
2201: FFKSIGTGTD SEVAALGERI ALLHGACSSV LVEIERRKAE LVGNDDFNMS LHQVDEDFSS MESVRSMVNR LSSAVKELVV ANAETLERNE KEMKVIIANL
2301: QRELHEKDIQ NNRTCNELVG QVKEAQAGAK IFAEDLQSAS ARMRDMQDQL GILVRERDSM KERVKELLAG QASHSELQEK VTSLSDLLAA KDLEIEALMQ
2401: ALDEEESQME DLKLRVTELE QEVQQKNLDL QKAEASRGKI SKKLSITVDK FDELHHLSEN LLAEIEKLQQ QVQDRDTEVS FLRQEVTRCT NEALAASQMG
2501: TKRDSEEIQT VLSWFDTIAS LLGIEDSLST DADSHINHYM ETFEKRIASM LSEIDELRLV GQSKDVLLEG ERSRVAELRQ KEATLEKFLL EKESQQDIST
2601: SSTSEIVEVE PLINKWTKTS IPSQVRSLRK GNMDQVAISI DADQTDQSGS LEEDDDKDHS LRQESFLDSQ DPSLTWSMVY GQTLFIHGSR SVVSCDRTLM
2701: RQPALRLGIM LYWAILHALL AAFVV
0101: AHEYVSVHGS SSEPDALQPG HTTSNDGSEA RKEVVNSEND ISKSLSTEEE NVKSINSGVA GTVDSLISDP ADSEKGVTHD DASNVDGIFA ASGNIAEGEG
0201: VEVEGGSGNV EKPHQPSSLQ EYIPDVSLIR ARGDQVTDEE DMEQFSELSA KAGVDKIATE ERQTSYPAVV DSSASPSHFS EGSSVAFDTV ELEGINGNFR
0301: SQQIREAAEL NEEKPETSID FPNNRDHVLS AEPEESSVAE MASQLQLPES VSISGVLSHE ETRKIDTLNL SAELTSAHVH EGRSVSFLQL MDIVKGLGQD
0401: EYQILCNARE AASSTEPGTS SLERLREELF VSSTMEDILH VQLTEQSHLQ IEFDHQHNQF VAEISQLRAS YSAVTERNDS LAEELSECQS KLYAATSSNT
0501: NLENQLLATE AQVEDFTAKM NELQLSLEKS LLDLSETKEK FINLQVENDT LVAVISSMND EKKELIEEKE SKNYEIKHLS SELCNCKNLA AILKAEVEQF
0601: ENTIGPLTDE KIHLVEEKYS LLGEAEKLQE ELANCKTVVT LQEVENSNMK ETLSLLTRQQ TMFEENNIHL REENEKAHLE LSAHLISETY LLSEYSNLKE
0701: GYTLLNNKLL KFQGEKEHLV EENDKLTQEL LTLQEHMSTV EEERTHLEVE LREAIARLDK LAEENTSLTS SIMVEKARMV DNGSADVSGL INQEISEKLG
0801: RSSEIGVSKQ SASFLENTQY TNLEEVREYT SEFSALMKNL EKGEKMVQNL EEAIKQILTD SSVSKSSDKG ATPAVSKLIQ AFESKRKPEE PESENAQLTD
0901: DLSEADQFVS VNVQIRNLRG LLDQLLLNAR KAGIQFNQLN DDRTSTNQRL EELNVEFASH QDHINVLEAD TIESKVSFEA LKHYSYELQH KNHDLELLCD
1001: SLKLRNDNIS VENTELNKKL NYCSLRIDEL EIQLENLQQN LTSFLSTMEE QLVALQDESE RAMMVEHELT SLMSEFGEAV VRLDDCLLRS GTSGAHTGLD
1101: MTKRISGSVD VAVNVIEDLK EKLEAAYVKH ESTSNKYEEL KQSFNTLFEK NEFTASSMQK VYADLTKLIT ESCGSAEMTS LEVENVAVFD PFRDGSFENL
1201: LEAVRKILSE RLELQSVIDK LQSDLSSKSN DMEEMTQRSL DSTSLRELVE KVEGLLELES GVIFESPSSQ VEFLVSQLVQ KFIEIEELAN LLRKQLEAKG
1301: NELMEIEESL LHHKTKIAGL RESLTQAEES LVAVRSELQD KSNELEQSEQ RLLSTREKLS IAVTKGKGLI VQRDNVKQSL AEASAKLQKC SEELNSKDAR
1401: LVEVEKKLKT YIEAGERVEA LESELSYIRN SATALRESFL LKDSLLHRIE EILEDLDLPE HFHARDILEK VEWLARSANG NSSRPSGWDQ KSSDGGAGFV
1501: LSEPWREDVQ TGTSSEDDLR IKFEELKGKF YGLAEQNEML EQSLMERNTL VQRWEKLLEN IDIPPQLHSM EVENKIEWLA STITEATHDR DNLQQKIDNL
1601: EVYCQSVTTD LEVSQKQVGD VEGNLQSCVS ERVNLSERLE SLIGDHESLS ARGIHLEVEN EKLQNQVKDL HEKLVEKLGN EEHFQTIEGD LLSLRYMIDD
1701: VIQEDGLQDL ALASNSENLD GVLRKLIDYY KNLVKSSLPG ETDDNVCETR PSDADVRSGE SLGAHGATSH GQHFELSDSN VVEATSRDIA VVETPDVASL
1801: TKDLDQALHV QKLTREERDL YMAKQQSLVA ENEALDKKII ELQEFLKQEE QKSASVREKL NVAVRKGKAL VQQRDSLKQT IEEVNAELGR LKSEIIKRDE
1901: KLLENEKKFR ELESYSVRVE SLESECQLLK IHSQETEYLL QERSGNLSMT LNALNSIDIG DEGDINDPVM KLQRISQLFQ TMSTTVTSAE QESRKSRRAA
2001: ELLLAELNEV QETNDSLQED LSKFTYEIQQ LSREKDAAEA AKVEAISRFE NLSAVSNEEK NKLYAQLLSC GTSVNSLRKI LAGTNSCLAD IFIMDMEFLH
2101: HLKANMELCA KKTGTDLSGL PQLSTENLVD KEIFARLSAA WSNINLHETS SGGNIAEICG SLSQNLDQFV VGVSHLEEKV SKHLATWHDQ INIVSNSIDT
2201: FFKSIGTGTD SEVAALGERI ALLHGACSSV LVEIERRKAE LVGNDDFNMS LHQVDEDFSS MESVRSMVNR LSSAVKELVV ANAETLERNE KEMKVIIANL
2301: QRELHEKDIQ NNRTCNELVG QVKEAQAGAK IFAEDLQSAS ARMRDMQDQL GILVRERDSM KERVKELLAG QASHSELQEK VTSLSDLLAA KDLEIEALMQ
2401: ALDEEESQME DLKLRVTELE QEVQQKNLDL QKAEASRGKI SKKLSITVDK FDELHHLSEN LLAEIEKLQQ QVQDRDTEVS FLRQEVTRCT NEALAASQMG
2501: TKRDSEEIQT VLSWFDTIAS LLGIEDSLST DADSHINHYM ETFEKRIASM LSEIDELRLV GQSKDVLLEG ERSRVAELRQ KEATLEKFLL EKESQQDIST
2601: SSTSEIVEVE PLINKWTKTS IPSQVRSLRK GNMDQVAISI DADQTDQSGS LEEDDDKDHS LRQESFLDSQ DPSLTWSMVY GQTLFIHGSR SVVSCDRTLM
2701: RQPALRLGIM LYWAILHALL AAFVV
Arabidopsis Description
CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24460.1); Has 194354 Blast hits to 66887 proteins in 3244 species: Archae - 3688; Bacteria - 38556; Metazoa - 84828; Fu /.../17265; Plants - 10589; Viruses - 805; Other Eukaryotes - 38623 (source: NCBI BLink). [Source:TAIR;Acc:AT4G31570]
SUBAcon: [golgi,nucleus,cytosol]
SUBAcon: [golgi,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.