CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022742.1-P	Field mustard	plastid	99.71	99.71
CDY41008	Canola	peroxisome	79.94	99.64
CDY47441	Canola	plastid	96.28	95.45
CDY52570	Canola	plastid	95.7	94.89
CDY43024	Canola	plastid	95.13	94.59
CDY42479	Canola	plastid	69.91	94.57
AT5G54770.1	Thale cress	plastid	93.7	93.7
GSMUA_Achr7P00180_001	Banana	cytosol	22.35	82.98
VIT_10s0116g00530.t01	Wine grape	plastid	80.23	78.87
VIT_19s0177g00140.t01	Wine grape	plastid	78.22	77.34
Solyc07g064160.2.1	Tomato	plastid	77.65	76.55
Os07t0529600-01	Rice	plastid	77.36	76.06
TraesCS7D01G373100.2	Wheat	plastid, unclear	75.93	75.5
TraesCS7A01G376800.1	Wheat	plastid	75.64	75.21
TraesCS7B01G278200.1	Wheat	plastid	75.64	75.21
EES03134	Sorghum	plastid	75.64	74.58
PGSC0003DMT400049574	Potato	plastid	76.22	74.51
Zm00001d011183_P001	Maize	plastid	75.36	74.29
EER99743	Sorghum	plastid	74.79	74.15
Zm00001d044228_P001	Maize	plastid	74.21	72.96
GSMUA_Achr2P14040_001	Banana	plastid	43.27	65.65
KRH65723	Soybean	cytosol	41.26	63.72
TraesCS3B01G435500.1	Wheat	plastid	61.6	63.61
HORVU7Hr1G090100.3	Barley	cytosol	66.48	62.53
HORVU3Hr1G090190.1	Barley	plastid	61.6	60.39

Protein Annotations

Gene3D:3.50.50.60	MapMan:7.2.2.1	GO:A0A078GUA1	UniProt:A0A078GUA1	EnsemblPlants:CDY28754	ProteinID:CDY28754
ProteinID:CDY28754.1	InterPro:FAD/NAD-bd_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009228	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987
GO:GO:0046872	GO:GO:0052837	EnsemblPlantsGene:GSBRNA2T00041394001	InterPro:IPR036188	HAMAP:MF_03158	PFAM:PF01946
PANTHER:PTHR43422	PANTHER:PTHR43422:SF3	SUPFAM:SSF51905	InterPro:Sti35	TIGRFAMs:TIGR00292	InterPro:Thi4_fam
UniParc:UPI0004EE6AE7	SEG:seg	:	:	:	:

Description

BnaA02g09460DThiamine thiazole synthase, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A078GUA1]

Coordinates

chrLK032226:-:29319..31465

Molecular Weight (calculated)

36869.5 Da

IEP (calculated)

5.621

GRAVY (calculated)

0.183

Length

349 amino acids

Sequence
(BLAST)

001: MASITSTLSL SSTKPQRLFD SYFHGSSISS AAPVSVGLKP RSLSVRATAG YDLNAFTFDP IKESIVSREM TRRYMTDMIT YAETDVVVVG AGSAGLSCAY
101: EISKNPNVQV AIIEQSVSPG GGAWLGGQLF SAMIVRKPAH LFLDEIGVAY DEQDNYVVIK HAALFTSTIM SKLLARPNVK LFNAVAAEDL IVKGNRVGGV
201: VTNWALVSMN HDTQSCMDPN VMEAKIVVSS CGHDGPFGAT GVKRLKSIGL IDHVPGMKAL DMNTAEDAIV RLTREVVPGM IVTGMEVAEI DGAPRMGPTF
301: GAMMISGQKA AHLALKALGQ PNVIDGSYVG DLSPELVLAA ADSAETVDA

Best Arabidopsis Sequence Match ( AT5G54770.1 )
(BLAST)

001: MAAIASTLSL SSTKPQRLFD SSFHGSAISA APISIGLKPR SFSVRATTAG YDLNAFTFDP IKESIVSREM TRRYMTDMIT YAETDVVVVG AGSAGLSAAY
101: EISKNPNVQV AIIEQSVSPG GGAWLGGQLF SAMIVRKPAH LFLDEIGVAY DEQDTYVVVK HAALFTSTIM SKLLARPNVK LFNAVAAEDL IVKGNRVGGV
201: VTNWALVAQN HHTQSCMDPN VMEAKIVVSS CGHDGPFGAT GVKRLKSIGM IDHVPGMKAL DMNTAEDAIV RLTREVVPGM IVTGMEVAEI DGAPRMGPTF
301: GAMMISGQKA GQLALKALGL PNAIDGTLVG NLSPELVLAA ADSAETVDA

Arabidopsis Description

THI1Thiamine thiazole synthase, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A178UNL2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.