Factsheet for TraesCS7B01G278200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G376800.1	Wheat	plastid	99.72	99.72
TraesCS7D01G373100.2	Wheat	plastid, unclear	99.43	99.43
Os07t0529600-01	Rice	plastid	88.6	87.61
CDY41008	Canola	peroxisome	67.52	84.64
GSMUA_Achr7P00180_001	Banana	cytosol	22.51	84.04
EER99743	Sorghum	plastid	82.91	82.67
Zm00001d011183_P001	Maize	plastid	82.34	81.64
EES03134	Sorghum	plastid	81.2	80.51
KRG91236	Soybean	plastid	79.2	79.2
KRH35585	Soybean	plastid	78.92	78.92
VIT_10s0116g00530.t01	Wine grape	plastid	79.77	78.87
Zm00001d044228_P001	Maize	plastid	79.49	78.59
KRH55656	Soybean	plastid	74.93	76.23
CDY28754	Canola	plastid	75.21	75.64
VIT_19s0177g00140.t01	Wine grape	plastid	76.07	75.64
AT5G54770.1	Thale cress	plastid	74.93	75.36
Bra022742.1-P	Field mustard	plastid	74.93	75.36
TraesCS3B01G435500.1	Wheat	plastid	72.36	75.15
Bra002957.1-P	Field mustard	plastid	75.21	75.0
CDY47441	Canola	plastid	75.21	75.0
KRH25861	Soybean	plastid	74.64	74.86
CDY52570	Canola	plastid	74.93	74.72
CDY43024	Canola	plastid	74.64	74.64
Solyc07g064160.2.1	Tomato	plastid	75.21	74.58
Bra029007.1-P	Field mustard	plastid	74.36	74.36
PGSC0003DMT400049574	Potato	plastid	74.64	73.39
HORVU7Hr1G090100.3	Barley	cytosol	77.21	73.05
CDY42479	Canola	plastid	52.99	72.09
GSMUA_Achr2P14040_001	Banana	plastid	43.59	66.52
KRH65723	Soybean	cytosol	41.31	64.16

Protein Annotations

EnsemblPlants:TraesCS7B01G278200.1	EnsemblPlantsGene:TraesCS7B01G278200	Gene3D:3.50.50.60	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009228	GO:GO:0009987	HAMAP:MF_03158	InterPro:FAD/NAD-bd_sf	InterPro:IPR036188
InterPro:Sti35	InterPro:Thi4_fam	PANTHER:PTHR43422	PANTHER:PTHR43422:SF3	PFAM:PF01946	SUPFAM:SSF51905
TIGRFAMs:TIGR00292	MapMan:7.2.2.1	:	:	:	:

Description

No Description!

Coordinates

chr7B:+:509512360..509513868

Molecular Weight (calculated)

37129.1 Da

IEP (calculated)

5.387

GRAVY (calculated)

0.175

Length

351 amino acids

Sequence
(BLAST)

001: MAAMATTASS LLKPSFSGVR LPAAARTPSC VATPRAGAIC NSISSSTPPY DLNAFKFSPI KESIVSREMT RRYMTDMITY ADTDVVIVGA GSAGLSCAYE
101: LSKDPSISIA IIEQSVSPGG GAWLGGQLFS AMVVRKPAHL FLDELNIEYD EQEDYVVIKH AALFTSTVMS RLLARPNVKL FNAVAVEDLI VKEDRVAGVV
201: TNWALVSMNH DTQSCMDPNV MEAKVVVSSC GHDGPFGATG VKRLQDIGMI QAVPGMKALD MNTAEDAIVR LTREVVPGMI VTGMEVAEID GAPRMGPTFG
301: AMMISGQKAA HLALKALGRP NGIDGTLKNV TPALHPEMIL AATNNGDIVD A

Best Arabidopsis Sequence Match ( AT5G54770.1 )
(BLAST)

001: MAAIASTLSL SSTKPQRLFD SSFHGSAISA APISIGLKPR SFSVRATTAG YDLNAFTFDP IKESIVSREM TRRYMTDMIT YAETDVVVVG AGSAGLSAAY
101: EISKNPNVQV AIIEQSVSPG GGAWLGGQLF SAMIVRKPAH LFLDEIGVAY DEQDTYVVVK HAALFTSTIM SKLLARPNVK LFNAVAAEDL IVKGNRVGGV
201: VTNWALVAQN HHTQSCMDPN VMEAKIVVSS CGHDGPFGAT GVKRLKSIGM IDHVPGMKAL DMNTAEDAIV RLTREVVPGM IVTGMEVAEI DGAPRMGPTF
301: GAMMISGQKA GQLALKALGL PNAIDGTLVG NLSPELVLAA ADSAETVDA

Arabidopsis Description

THI1Thiamine thiazole synthase, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A178UNL2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.