Factsheet for HORVU7Hr1G090100.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P00180_001	Banana	cytosol	21.29	84.04
CDY41008	Canola	peroxisome	62.53	82.86
TraesCS7D01G373100.2	Wheat	plastid, unclear	73.32	77.49
TraesCS7B01G278200.1	Wheat	plastid	73.05	77.21
TraesCS7A01G376800.1	Wheat	plastid	73.05	77.21
EER99743	Sorghum	plastid	66.04	69.6
Os07t0529600-01	Rice	plastid	66.31	69.3
KRG91236	Soybean	plastid	64.42	68.09
VIT_10s0116g00530.t01	Wine grape	plastid	64.96	67.89
KRH35585	Soybean	plastid	64.15	67.81
Zm00001d011183_P001	Maize	plastid	64.69	67.8
KRH55656	Soybean	plastid	62.53	67.25
Zm00001d044228_P001	Maize	plastid	64.15	67.04
EES03134	Sorghum	plastid	63.88	66.95
CDY28754	Canola	plastid	62.53	66.48
Bra022742.1-P	Field mustard	plastid	62.26	66.19
KRH25861	Soybean	plastid	61.99	65.71
CDY52570	Canola	plastid	62.26	65.62
CDY43024	Canola	plastid	61.99	65.53
VIT_19s0177g00140.t01	Wine grape	plastid	62.26	65.44
CDY47441	Canola	plastid	61.99	65.34
Bra002957.1-P	Field mustard	plastid	61.99	65.34
AT5G54770.1	Thale cress	plastid	61.46	65.33
Bra029007.1-P	Field mustard	plastid	61.73	65.24
Solyc07g064160.2.1	Tomato	plastid	61.99	64.97
PGSC0003DMT400049574	Potato	plastid	62.26	64.71
KRH65723	Soybean	cytosol	39.08	64.16
CDY42479	Canola	plastid	40.7	58.53
HORVU3Hr1G090190.1	Barley	plastid	53.37	55.62
GSMUA_Achr2P14040_001	Banana	plastid	30.73	49.57

Protein Annotations

EnsemblPlants:HORVU7Hr1G090100.3	EnsemblPlantsGene:HORVU7Hr1G090100	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:IPR036188	InterPro:Thi4_fam
PANTHER:PTHR43422	PANTHER:PTHR43422:SF3	PFAM:PF01946	SEG:seg	SUPFAM:SSF51905	TIGRFAMs:TIGR00292
UniParc:UPI000B478E26	UniProt:A0A287X9S2	MapMan:7.2.2.1	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:547824007..547825527

Molecular Weight (calculated)

29220.6 Da

IEP (calculated)

4.711

GRAVY (calculated)

0.186

Length

371 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXFMITY
101: ADTDVVIVGA GSAGLSCAYE LSKDPSISIA IIEQSVSPGG GAWLGGQLFS AMVVRKPAHL FLDELNIEYD EQEDYVVIKH AALFTSTIMS RLLARPNVKL
201: FNAVAVEDLI VKENRVAGVV TNWALVSMNH DTQSCMDPNV MEAKVVVSSC GHDGPFGATG VKRLQDIGMI QAVPGMKALD MNTAEDAIVR LTREVVPGMI
301: VTGMEVAEID GAPRMGPTFG AMMISGQKAA HLALKALGRP NGIDGTLKNV TPALHPEMIL AASNNADIVD A

Best Arabidopsis Sequence Match ( AT5G54770.1 )
(BLAST)

001: MAAIASTLSL SSTKPQRLFD SSFHGSAISA APISIGLKPR SFSVRATTAG YDLNAFTFDP IKESIVSREM TRRYMTDMIT YAETDVVVVG AGSAGLSAAY
101: EISKNPNVQV AIIEQSVSPG GGAWLGGQLF SAMIVRKPAH LFLDEIGVAY DEQDTYVVVK HAALFTSTIM SKLLARPNVK LFNAVAAEDL IVKGNRVGGV
201: VTNWALVAQN HHTQSCMDPN VMEAKIVVSS CGHDGPFGAT GVKRLKSIGM IDHVPGMKAL DMNTAEDAIV RLTREVVPGM IVTGMEVAEI DGAPRMGPTF
301: GAMMISGQKA GQLALKALGL PNAIDGTLVG NLSPELVLAA ADSAETVDA

Arabidopsis Description

THI1Thiamine thiazole synthase, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A178UNL2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.