Factsheet for Os07t0529600-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plastid: 23257241

plastid: 17189339

gfp PMID: 23257241 doi

L Xu, C Carrie, SR Law, MW Murcha, J Whelan

Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, Western Australia 6009, Australia.

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P00180_001	Banana	cytosol	23.66	89.36
TraesCS7D01G373100.2	Wheat	plastid, unclear	87.89	88.89
TraesCS7A01G376800.1	Wheat	plastid	87.89	88.89
TraesCS7B01G278200.1	Wheat	plastid	87.61	88.6
CDY41008	Canola	peroxisome	67.61	85.71
EER99743	Sorghum	plastid	83.66	84.38
Zm00001d011183_P001	Maize	plastid	82.82	83.05
EES03134	Sorghum	plastid	81.13	81.36
Zm00001d044228_P001	Maize	plastid	80.56	80.56
KRG91236	Soybean	plastid	79.15	80.06
KRH35585	Soybean	plastid	78.87	79.77
CDY28754	Canola	plastid	76.06	77.36
VIT_10s0116g00530.t01	Wine grape	plastid	77.18	77.18
AT5G54770.1	Thale cress	plastid	75.77	77.08
Bra022742.1-P	Field mustard	plastid	75.77	77.08
Bra002957.1-P	Field mustard	plastid	76.06	76.7
CDY47441	Canola	plastid	76.06	76.7
CDY43024	Canola	plastid	75.77	76.64
CDY52570	Canola	plastid	75.77	76.42
Bra029007.1-P	Field mustard	plastid	75.49	76.35
VIT_19s0177g00140.t01	Wine grape	plastid	75.21	75.64
KRH25861	Soybean	plastid	73.8	74.86
CDY42479	Canola	plastid	54.37	74.81
KRH55656	Soybean	plastid	72.68	74.78
Solyc07g064160.2.1	Tomato	plastid	73.8	74.01
PGSC0003DMT400049574	Potato	plastid	73.52	73.11
TraesCS3B01G435500.1	Wheat	plastid	67.04	70.41
GSMUA_Achr2P14040_001	Banana	plastid	43.94	67.83
HORVU7Hr1G090100.3	Barley	cytosol	69.3	66.31
KRH65723	Soybean	cytosol	41.69	65.49
HORVU3Hr1G090190.1	Barley	plastid	64.51	64.33

Protein Annotations

Gene3D:3.50.50.60	EntrezGene:4343443	MapMan:7.2.2.1	EMBL:AB110170	EMBL:AK099918	ProteinID:BAF21755.1
ProteinID:BAT01865.1	InterPro:FAD/NAD-bd_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005506	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005829
GO:GO:0006950	GO:GO:0006974	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058
GO:GO:0009228	GO:GO:0009409	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009579
GO:GO:0009628	GO:GO:0009941	GO:GO:0009987	GO:GO:0010319	GO:GO:0018131	GO:GO:0019904
GO:GO:0042803	GO:GO:0046872	GO:GO:0052837	InterPro:IPR036188	HAMAP:MF_03158	EnsemblPlantsGene:Os07g0529600
EnsemblPlants:Os07t0529600-01	PFAM:PF01946	PANTHER:PTHR43422	PANTHER:PTHR43422:SF3	UniProt:Q7XXS4	SUPFAM:SSF51905
InterPro:Sti35	TIGRFAMs:TIGR00292	InterPro:Thi4_fam	UniParc:UPI00001A4D27	RefSeq:XP_015647396.1	SEG:seg

Description

PATHOGEN-INDUCED DEFENSE-RESPONSIVE PROTEIN 8Similar to Thiazole biosynthetic enzyme 1-1, chloroplast precursor. (Os07t0529600-01);Similar to Pathogen-induced defense-responsive protein 8. (Os07t0529600-02)

Coordinates

chr7:+:20724581..20726069

Molecular Weight (calculated)

37227.0 Da

IEP (calculated)

5.406

GRAVY (calculated)

0.166

Length

355 amino acids

Sequence
(BLAST)

001: MAAMATTASS LLKTSFAGAR LPAAARNPTV SVAPRTGGAI CNSISSSSST PPYDLNAIRF SPIKESIVSR EMTRRYMTDM ITYADTDVVV VGAGSAGLSC
101: AYELSKDPSV SVAVIEQSVS PGGGAWLGGQ LFSAMVVRKP AHLFLDELGV AYDEQEDYVV IKHAALFTST VMSRLLARPN VKLFNAVAVE DLIVKEGRVG
201: GVVTNWALVS MNHDTQSCMD PNVMESRVVV SSCGHDGPFG ATGVKRLQDI GMIDAVPGMR ALDMNTAEDE IVRLTREVVP GMIVTGMEVA EIDGAPRMGP
301: TFGAMMISGQ KAAHLALKAL GRPNAIDGTI KKAAAAAAHP ELILASKDDG EIVDA

Best Arabidopsis Sequence Match ( AT5G54770.1 )
(BLAST)

001: MAAIASTLSL SSTKPQRLFD SSFHGSAISA APISIGLKPR SFSVRATTAG YDLNAFTFDP IKESIVSREM TRRYMTDMIT YAETDVVVVG AGSAGLSAAY
101: EISKNPNVQV AIIEQSVSPG GGAWLGGQLF SAMIVRKPAH LFLDEIGVAY DEQDTYVVVK HAALFTSTIM SKLLARPNVK LFNAVAAEDL IVKGNRVGGV
201: VTNWALVAQN HHTQSCMDPN VMEAKIVVSS CGHDGPFGAT GVKRLKSIGM IDHVPGMKAL DMNTAEDAIV RLTREVVPGM IVTGMEVAEI DGAPRMGPTF
301: GAMMISGQKA GQLALKALGL PNAIDGTLVG NLSPELVLAA ADSAETVDA

Arabidopsis Description

THI1Thiamine thiazole synthase, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A178UNL2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.