Factsheet for TraesCS3B01G435500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G090190.1	Barley	plastid	80.18	76.12
TraesCS7B01G278200.1	Wheat	plastid	75.15	72.36
CDY41008	Canola	peroxisome	57.1	68.93
EER99743	Sorghum	plastid	70.12	67.33
Os07t0529600-01	Rice	plastid	70.41	67.04
Zm00001d011183_P001	Maize	plastid	69.82	66.67
EES03134	Sorghum	plastid	68.93	65.82
Zm00001d044228_P001	Maize	plastid	67.75	64.51
KRG91236	Soybean	plastid	65.38	62.96
KRH35585	Soybean	plastid	65.38	62.96
Solyc07g064160.2.1	Tomato	plastid	65.09	62.15
KRH55656	Soybean	plastid	63.31	62.03
VIT_10s0116g00530.t01	Wine grape	plastid	65.09	61.97
KRH25861	Soybean	plastid	63.91	61.71
GSMUA_Achr7P00180_001	Banana	cytosol	17.16	61.7
CDY28754	Canola	plastid	63.61	61.6
Bra022742.1-P	Field mustard	plastid	63.61	61.6
VIT_19s0177g00140.t01	Wine grape	plastid	63.31	60.62
CDY42479	Canola	plastid	46.15	60.47
CDY43024	Canola	plastid	62.72	60.4
CDY52570	Canola	plastid	62.72	60.23
Bra002957.1-P	Field mustard	plastid	62.72	60.23
CDY47441	Canola	plastid	62.72	60.23
PGSC0003DMT400049574	Potato	plastid	63.31	59.94
AT5G54770.1	Thale cress	plastid	61.83	59.89
Bra029007.1-P	Field mustard	plastid	62.13	59.83
KRH65723	Soybean	cytosol	36.98	55.31
GSMUA_Achr2P14040_001	Banana	plastid	35.21	51.74

Protein Annotations

EnsemblPlants:TraesCS3B01G435500.1	EnsemblPlantsGene:TraesCS3B01G435500	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:IPR036188	InterPro:Thi4_fam
PANTHER:PTHR43422	PANTHER:PTHR43422:SF3	PFAM:PF01946	SUPFAM:SSF51905	TIGRFAMs:TIGR00292	MapMan:7.2.2.1

Description

No Description!

Coordinates

chr3B:-:673845884..673847032

Molecular Weight (calculated)

36139.7 Da

IEP (calculated)

6.395

GRAVY (calculated)

0.109

Length

338 amino acids

Sequence
(BLAST)

001: MAAMTITTSS FLKTSFPGVC IPAATRTPSC AATRRTGAIC NSISSCTPPY DLSSFKFSPM KESVASREMI RRYMTDMIAD VNTDVIIIGT GSAGLSCAYE
101: LSKDPSVNIA IIQRSVSPGG SGWLGSQLFS AMVVRKPAHL FLDELNIEYD EQEDYVVIKH AALFTSTVLS RLLARPNVKL FNGVVVEDLV VKEHRVTGVV
201: TNWALVSMNQ DTHSQTQSHM DANVMEAKIV VSSCGHEGLF SANGKGVKRL EDIGMIKTVP RTGMEALDTN VSEDAIVGLT REVVPGMIVA GIEVAEIDGP
301: QRMCPTFGAT IISGQKAAHL ALKALGRPNG IDSETVPA

Best Arabidopsis Sequence Match ( AT5G54770.1 )
(BLAST)

001: MAAIASTLSL SSTKPQRLFD SSFHGSAISA APISIGLKPR SFSVRATTAG YDLNAFTFDP IKESIVSREM TRRYMTDMIT YAETDVVVVG AGSAGLSAAY
101: EISKNPNVQV AIIEQSVSPG GGAWLGGQLF SAMIVRKPAH LFLDEIGVAY DEQDTYVVVK HAALFTSTIM SKLLARPNVK LFNAVAAEDL IVKGNRVGGV
201: VTNWALVAQN HHTQSCMDPN VMEAKIVVSS CGHDGPFGAT GVKRLKSIGM IDHVPGMKAL DMNTAEDAIV RLTREVVPGM IVTGMEVAEI DGAPRMGPTF
301: GAMMISGQKA GQLALKALGL PNAIDGTLVG NLSPELVLAA ADSAETVDA

Arabidopsis Description

THI1Thiamine thiazole synthase, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A178UNL2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.